RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-216ENST00000461187 TDHQ8IZJ6 230 aa17.65■□□□□ 0.42
SMPD4-216ENST00000461187 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMPD4-216ENST00000461187 UBE2OQ9C0C9 1292 aaKnown RBP17.65■□□□□ 0.42
SMPD4-216ENST00000461187 DCTPP1Q9H773 170 aa17.65■□□□□ 0.42
SMPD4-216ENST00000461187 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
SMPD4-216ENST00000461187 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-216ENST00000461187 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
SMPD4-216ENST00000461187 SBK1Q52WX2 424 aa17.64■□□□□ 0.41
SMPD4-216ENST00000461187 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
SMPD4-216ENST00000461187 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
SMPD4-216ENST00000461187 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
SMPD4-216ENST00000461187 SEPT4O43236 478 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 SLC25A27O95847 323 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 FCER1AP12319 257 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 PRAMEF19Q5SWL8 479 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 GJC2Q5T442 439 aaPredicted RBP17.63■□□□□ 0.41
SMPD4-216ENST00000461187 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 MAML3Q96JK9 1138 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 GOPCQ9HD26 462 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
SMPD4-216ENST00000461187 VWA5AO00534 786 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 RASA1P20936 1047 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 ATN1P54259 1190 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-216ENST00000461187 MDM2Q00987 491 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-216ENST00000461187 FAM83BQ5T0W9 1011 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 ANO1Q5XXA6 986 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 TSHZ3Q63HK5 1081 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 RIOX2Q8IUF8 465 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 ARRDC4Q8NCT1 418 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 APPBP2Q92624 585 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 PPP1R9AQ9ULJ8 1098 aa17.62■□□□□ 0.41
SMPD4-216ENST00000461187 RNF113AO15541 343 aaKnown RBP17.61■□□□□ 0.41
SMPD4-216ENST00000461187 REPS2Q8NFH8 660 aa17.61■□□□□ 0.41
SMPD4-216ENST00000461187 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
SMPD4-216ENST00000461187 MMP19Q99542 508 aa17.61■□□□□ 0.41
SMPD4-216ENST00000461187 ZNF214Q9UL59 606 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-216ENST00000461187 MINDY4BA8MYZ0 360 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 RAD21O60216 631 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 STAT3P40763 770 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 RTP1P59025 263 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 STK11IPQ8N1F8 1099 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 MKNK2Q9HBH9 465 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-216ENST00000461187 NYAP2Q9P242 653 aa17.6■□□□□ 0.41
SMPD4-216ENST00000461187 KBTBD13C9JR72 458 aa17.59■□□□□ 0.41
SMPD4-216ENST00000461187 GPAA1O43292 621 aa17.59■□□□□ 0.41
SMPD4-216ENST00000461187 PGK2P07205 417 aa17.59■□□□□ 0.41
SMPD4-216ENST00000461187 SLC39A5Q6ZMH5 540 aa17.59■□□□□ 0.41
SMPD4-216ENST00000461187 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
SMPD4-216ENST00000461187 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-216ENST00000461187 DIS3Q9Y2L1 958 aaKnown RBP17.59■□□□□ 0.41
SMPD4-216ENST00000461187 A0A0C4DFX4 3053 aa17.58■□□□□ 0.41
SMPD4-216ENST00000461187 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 M0R2C6 588 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-216ENST00000461187 LRRC41Q15345 812 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 ZNF792Q3KQV3 632 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 Q7L0L9 218 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 TINF2Q9BSI4 451 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 NRBP1Q9UHY1 535 aa17.58■□□□□ 0.4
SMPD4-216ENST00000461187 F5H6K3 240 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 NDUFB10O96000 172 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 GNAT2P19087 354 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 COPB2P35606 906 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 KLRC3Q07444 240 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 KCTD2Q14681 263 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 SNX17Q15036 470 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 LBHD1Q9BQE6 289 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-216ENST00000461187 ATP11BQ9Y2G3 1177 aa17.57■□□□□ 0.4
SMPD4-216ENST00000461187 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-216ENST00000461187 TAL1P17542 331 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-216ENST00000461187 ADCYAP1R1P41586 468 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 TDO2P48775 406 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 MTMR10Q9NXD2 777 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 PRKAG2Q9UGJ0 569 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 MYO9BQ13459 2157 aa17.56■□□□□ 0.4
SMPD4-216ENST00000461187 LCTP09848 1927 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
SMPD4-216ENST00000461187 PRDM1O75626 825 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 APPP05067 770 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 ZNF444Q8N0Y2 327 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-216ENST00000461187 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
SMPD4-216ENST00000461187 SLC17A8Q8NDX2 589 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 MKL1Q969V6 931 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 FERMT2Q96AC1 680 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 CEP95Q96GE4 821 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 SEC62Q99442 399 aaKnown RBP17.55■□□□□ 0.4
SMPD4-216ENST00000461187 TEX13BQ9BXU2 312 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
SMPD4-216ENST00000461187 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms