RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 ZKSCAN1P17029 563 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-205ENST00000461154 COG2Q14746 738 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 SLFN13Q68D06 897 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 NBPF11Q86T75 865 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 COA7Q96BR5 231 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 HOXC10Q9NYD6 342 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 RBPJLQ9UBG7 517 aa19.1■□□□□ 0.65
SHANK1-205ENST00000461154 FLOT1O75955 427 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 KRT32Q14532 448 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
SHANK1-205ENST00000461154 SLC9C1Q4G0N8 1177 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 FAM83BQ5T0W9 1011 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 LBX2Q6XYB7 198 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 RAET1EQ8TD07 263 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 ARMC5Q96C12 935 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 GMCL1Q96IK5 515 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 TMEM47Q9BQJ4 181 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 RABGAP1Q9Y3P9 1069 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
SHANK1-205ENST00000461154 TNKSO95271 1327 aa19.08■□□□□ 0.65
SHANK1-205ENST00000461154 ERICH2A1L162 156 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 RCSD1Q6JBY9 416 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 STOX1Q6ZVD7 989 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 NKX2-3Q8TAU0 364 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 PAGR1Q9BTK6 254 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 TXNRD2Q9NNW7 524 aa19.08■□□□□ 0.64
SHANK1-205ENST00000461154 SPDYE16A6NNV3 312 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 BMP3P12645 472 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 SLC1A4P43007 532 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 ERVK-24P63145 666 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 PRKCZQ05513 592 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 CYB5R4Q7L1T6 521 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 CCAR1Q8IX12 1150 aaKnown RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 MB21D2Q8IYB1 491 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 ENAHQ8N8S7 591 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 DCAF4Q8WV16 495 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 ANKS1AQ92625 1134 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 NUP88Q99567 741 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 KAT14Q9H8E8 782 aa19.07■□□□□ 0.64
SHANK1-205ENST00000461154 ISY1Q9ULR0 285 aaKnown RBP19.07■□□□□ 0.64
SHANK1-205ENST00000461154 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
SHANK1-205ENST00000461154 MCCP23508 829 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 MAPK4P31152 587 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 DSG3P32926 999 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 MCM5P33992 734 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 HSPA4P34932 840 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 FLT3LGP49771 235 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 CCNA1P78396 465 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 IFIT1BQ5T764 474 aaKnown RBP19.06■□□□□ 0.64
SHANK1-205ENST00000461154 MB21D1Q8N884 522 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 MTA3Q9BTC8 594 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 GABRQQ9UN88 632 aa19.06■□□□□ 0.64
SHANK1-205ENST00000461154 PARP14Q460N5 1801 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 IRF5Q13568 498 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 Q3C1V9 767 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-205ENST00000461154 PRPF38AQ8NAV1 312 aaKnown RBP19.05■□□□□ 0.64
SHANK1-205ENST00000461154 PNMA1Q8ND90 353 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 SLF1Q9BQI6 1058 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
SHANK1-205ENST00000461154 RLFQ13129 1914 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 A0A0G2JMZ2 1700 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 HMGB1P09429 215 aaKnown RBP19.04■□□□□ 0.64
SHANK1-205ENST00000461154 GRK4P32298 578 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 RGS19P49795 217 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 SOX10P56693 466 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 SEC23AQ15436 765 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 POTEEQ6S8J3 1075 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 FAM160B2Q86V87 743 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 RASEFQ8IZ41 740 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 CHURC1Q8WUH1 139 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 KCNB2Q92953 911 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 ZNF333Q96JL9 665 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 USP26Q9BXU7 913 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 FBXO28Q9NVF7 368 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 ZSWIM8A7E2V4 1837 aa19.04■□□□□ 0.64
SHANK1-205ENST00000461154 TMEM232C9JQI7 657 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 PRC1O43663 620 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 PEX10O60683 326 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 PLA2G6O60733 806 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 CNMDO75829 334 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 STAT2P52630 851 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-205ENST00000461154 WTAPQ15007 396 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 TMEM67Q5HYA8 995 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 CHST3Q7LGC8 479 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 SLAIN1Q8ND83 568 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 PXYLP1Q8TE99 480 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 SH3TC2Q8TF17 1288 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 ATG4CQ96DT6 458 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 TMEM87BQ96K49 555 aa19.03■□□□□ 0.64
SHANK1-205ENST00000461154 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
SHANK1-205ENST00000461154 ADAMTS5Q9UNA0 930 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms