RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
HDLBP-229ENST00000460826 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
HDLBP-229ENST00000460826 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
HDLBP-229ENST00000460826 BMP3P12645 472 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 MCM5P33992 734 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 CAP1Q01518 475 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 KRT32Q14532 448 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 ZNF296Q8WUU4 475 aaPredicted RBP16.44■□□□□ 0.22
HDLBP-229ENST00000460826 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 TCEANC2Q96MN5 208 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
HDLBP-229ENST00000460826 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
HDLBP-229ENST00000460826 SH2B2O14492 632 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 CNMDO75829 334 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 FLOT1O75955 427 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 DSG3P32926 999 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 COG2Q14746 738 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 PNMA1Q8ND90 353 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 ATG4CQ96DT6 458 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 RBPJLQ9UBG7 517 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 SMCHD1A6NHR9 2005 aa16.43■□□□□ 0.22
HDLBP-229ENST00000460826 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
HDLBP-229ENST00000460826 FKTNO75072 461 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 PDHBP11177 359 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 SLC1A4P43007 532 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 WTAPQ15007 396 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 PAGR1Q9BTK6 254 aa16.42■□□□□ 0.22
HDLBP-229ENST00000460826 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
HDLBP-229ENST00000460826 FRMPD2Q68DX3 1309 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-229ENST00000460826 ERICH2A1L162 156 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
HDLBP-229ENST00000460826 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 CTGFP29279 349 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 GCLCP48506 637 aaPredicted RBP16.41■□□□□ 0.22
HDLBP-229ENST00000460826 SP3Q02447 781 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
HDLBP-229ENST00000460826 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
HDLBP-229ENST00000460826 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 MTA3Q9BTC8 594 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
HDLBP-229ENST00000460826 GOLGA8HP0CJ92 632 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
HDLBP-229ENST00000460826 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 FAM110CQ1W6H9 321 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 Q3C1V9 767 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 MYH6P13533 1939 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
HDLBP-229ENST00000460826 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
HDLBP-229ENST00000460826 RPS6KB1P23443 525 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 BLOC1S2Q6QNY1 142 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 GTF3C2Q8WUA4 911 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-229ENST00000460826 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
HDLBP-229ENST00000460826 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 VWA5AO00534 786 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
HDLBP-229ENST00000460826 PSMA5P28066 241 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 SLC16A2P36021 539 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 LIFRP42702 1097 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 STAT2P52630 851 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 ERVK-24P63145 666 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
HDLBP-229ENST00000460826 TROAPQ12815 778 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 PRPF38AQ8NAV1 312 aaKnown RBP16.38■□□□□ 0.21
HDLBP-229ENST00000460826 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 UPF3BQ9BZI7 483 aaKnown RBP16.38■□□□□ 0.21
HDLBP-229ENST00000460826 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
HDLBP-229ENST00000460826 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
HDLBP-229ENST00000460826 PLA2G6O60733 806 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 ANAPC15P60006 121 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms