RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SYKP43405 635 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 NDUFA8P51970 172 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 HDLBPQ00341 1268 aaKnown RBP16.17■□□□□ 0.18
ERCC3-205ENST00000460485 TFAP4Q01664 338 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 DIXDC1Q155Q3 683 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
ERCC3-205ENST00000460485 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 PNMA1Q8ND90 353 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 NEDD1Q8NHV4 660 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 CCDC12Q8WUD4 166 aaPredicted RBP16.17■□□□□ 0.18
ERCC3-205ENST00000460485 TGFBRAP1Q8WUH2 860 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 FERMT2Q96AC1 680 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 SNED1Q8TER0 1413 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 PPFIA3O75145 1194 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 PTPREP23469 700 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
ERCC3-205ENST00000460485 RHBDL3P58872 404 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 DGKZQ13574 1117 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 PKN1Q16512 942 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 RCSD1Q6JBY9 416 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 SAPCD2Q86UD0 394 aa16.16■□□□□ 0.18
ERCC3-205ENST00000460485 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-205ENST00000460485 A0A1B0GVL5 298 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 BECN2A8MW95 431 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
ERCC3-205ENST00000460485 CYP2D6P10635 497 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 NOVP48745 357 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 GRM1Q13255 1194 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 DAGLBQ8NCG7 672 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 GJB4Q9NTQ9 266 aa16.15■□□□□ 0.18
ERCC3-205ENST00000460485 SRPRBQ9Y5M8 271 aaKnown RBP16.15■□□□□ 0.18
ERCC3-205ENST00000460485 COL2A1P02458 1487 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-205ENST00000460485 SMTNL1A8MU46 457 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 G3V3G9 751 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 AOC2O75106 756 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 RASA1P20936 1047 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 EPS15P42566 896 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 SCNN1DP51172 638 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
ERCC3-205ENST00000460485 ORC2Q13416 577 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-205ENST00000460485 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-205ENST00000460485 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-205ENST00000460485 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 MRFAP1L1Q96HT8 127 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 DNAJC25Q9H1X3 360 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 TUBE1Q9UJT0 475 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 DAGLAQ9Y4D2 1042 aa16.14■□□□□ 0.17
ERCC3-205ENST00000460485 MYH4Q9Y623 1939 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 TOP1P11387 765 aaKnown RBP16.13■□□□□ 0.17
ERCC3-205ENST00000460485 CDK8P49336 464 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 NLRP12P59046 1061 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 GTF2IP78347 998 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 IQCB1Q15051 598 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 EHD4Q9H223 541 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 DACH1Q9UI36 760 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 KCNJ14Q9UNX9 436 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
ERCC3-205ENST00000460485 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-205ENST00000460485 TRAF5O00463 557 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 IKBKBO14920 756 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 WDHD1O75717 1129 aaPredicted RBP16.12■□□□□ 0.17
ERCC3-205ENST00000460485 HLA-DOAP06340 250 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 STRIP1Q5VSL9 837 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 PRPF38BQ5VTL8 546 aaKnown RBP16.12■□□□□ 0.17
ERCC3-205ENST00000460485 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
ERCC3-205ENST00000460485 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 SRBD1Q8N5C6 995 aaKnown RBP16.12■□□□□ 0.17
ERCC3-205ENST00000460485 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
ERCC3-205ENST00000460485 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
ERCC3-205ENST00000460485 LAD1O00515 517 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 NEMFO60524 1076 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-205ENST00000460485 TOB1P50616 345 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-205ENST00000460485 NLRP5P59047 1200 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
ERCC3-205ENST00000460485 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
ERCC3-205ENST00000460485 PALM3A6NDB9 673 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-205ENST00000460485 ZNF75DP51815 510 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms