RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-213ENST00000460211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
ATG4B-213ENST00000460211 RAD50Q92878 1312 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 EVI5O60447 810 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 MB21D1Q8N884 522 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 MKL1Q969V6 931 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 CEP95Q96GE4 821 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 PRO3102Q9H379 93 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 TXNRD2Q9NNW7 524 aa17.68■□□□□ 0.42
ATG4B-213ENST00000460211 PLIN4Q96Q06 1357 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-213ENST00000460211 F5H6K3 240 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 FGRP09769 529 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 CHMLP26374 656 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 NT5C2P49902 561 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 HAND2P61296 217 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 KLRC3Q07444 240 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 RRP12Q5JTH9 1297 aaKnown RBP17.67■□□□□ 0.42
ATG4B-213ENST00000460211 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
ATG4B-213ENST00000460211 DSG3P32926 999 aa17.66■□□□□ 0.42
ATG4B-213ENST00000460211 IRF5Q13568 498 aa17.66■□□□□ 0.42
ATG4B-213ENST00000460211 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
ATG4B-213ENST00000460211 Q3C1V9 767 aa17.66■□□□□ 0.42
ATG4B-213ENST00000460211 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
ATG4B-213ENST00000460211 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 ALPK3Q96L96 1907 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 SOX1O00570 391 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-213ENST00000460211 NDUFB10O96000 172 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-213ENST00000460211 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 ESR2Q92731 530 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
ATG4B-213ENST00000460211 PEX10O60683 326 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 WDR78Q5VTH9 848 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 GMCL1P1Q8NEA9 526 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 PXYLP1Q8TE99 480 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 LRCH3Q96II8 777 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 PAWRQ96IZ0 340 aaKnown RBP17.64■□□□□ 0.41
ATG4B-213ENST00000460211 IVNS1ABPQ9Y6Y0 642 aa17.64■□□□□ 0.41
ATG4B-213ENST00000460211 CNMDO75829 334 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 PLS1Q14651 629 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 SLFN13Q68D06 897 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 KIAA1211Q6ZU35 1233 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 GPR142Q7Z601 462 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 LRRC47Q8N1G4 583 aaKnown RBP17.63■□□□□ 0.41
ATG4B-213ENST00000460211 SLC17A8Q8NDX2 589 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 DIS3LQ8TF46 1054 aaKnown RBP17.63■□□□□ 0.41
ATG4B-213ENST00000460211 ATG4CQ96DT6 458 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 PORCNQ9H237 461 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 PAK6Q9NQU5 681 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-213ENST00000460211 BTBD7Q9P203 1132 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 PPP1R9AQ9ULJ8 1098 aa17.63■□□□□ 0.41
ATG4B-213ENST00000460211 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
ATG4B-213ENST00000460211 CTDP1Q9Y5B0 961 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-213ENST00000460211 CCDC178Q5BJE1 867 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 POTEEQ6S8J3 1075 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
ATG4B-213ENST00000460211 SLF1Q9BQI6 1058 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 SPATC1LQ9H0A9 340 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 GJD2Q9UKL4 321 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 TACC3Q9Y6A5 838 aa17.62■□□□□ 0.41
ATG4B-213ENST00000460211 SGSM2O43147 1006 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 NMT2O60551 498 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 BMP3P12645 472 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 SLC1A4P43007 532 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
ATG4B-213ENST00000460211 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 TTC14Q96N46 770 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 NUP88Q99567 741 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-213ENST00000460211 KRT23Q9C075 422 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.415e-6■□□□□ 8.4
ATG4B-213ENST00000460211 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
ATG4B-213ENST00000460211 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-213ENST00000460211 VWA5AO00534 786 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 DLL1O00548 723 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 ZBED4O75132 1171 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 SLC25A27O95847 323 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 TOP1P11387 765 aaKnown RBP17.6■□□□□ 0.41
ATG4B-213ENST00000460211 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
ATG4B-213ENST00000460211 CYP2B6P20813 491 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 COPB2P35606 906 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 RGS2P41220 211 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 TRDNQ13061 729 aa17.6■□□□□ 0.41
ATG4B-213ENST00000460211 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms