RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 MMP19Q99542 508 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 CRNKL1Q9BZJ0 848 aaKnown RBP9.57□□□□□ -0.88
HPS4-207ENST00000459918 GPR108Q9NPR9 543 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 STARD7Q9NQZ5 370 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
HPS4-207ENST00000459918 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
HPS4-207ENST00000459918 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
HPS4-207ENST00000459918 A0A1W2PQ45 241 aaPredicted RBP9.56□□□□□ -0.88
HPS4-207ENST00000459918 A0A1W2PQY0 241 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 COBLO75128 1261 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 BCAR3O75815 825 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 PGK2P07205 417 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 TRIM27P14373 513 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 AKR1A1P14550 325 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 SLC4A3P48751 1232 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 PLCD1P51178 756 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 ICA1Q05084 483 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
HPS4-207ENST00000459918 SLC44A5Q8NCS7 719 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 NUP133Q8WUM0 1156 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 VTI1AQ96AJ9 217 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 ZNF576Q9H609 170 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 DBNLQ9UJU6 430 aaKnown RBP9.56□□□□□ -0.88
HPS4-207ENST00000459918 PHF24Q9UPV7 400 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 SMCHD1A6NHR9 2005 aa9.56□□□□□ -0.88
HPS4-207ENST00000459918 BAZ2AQ9UIF9 1905 aaKnown RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 A0A1W2PRG0 241 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 IGFBP4P22692 258 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 EPHB4P54760 987 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 CCDC85BQ15834 202 aaPredicted RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 C1orf53Q5VUE5 145 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 TMEM179Q6ZVK1 233 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 ABRAQ8N0Z2 381 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 USP38Q8NB14 1042 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 LENG1Q96BZ8 264 aaPredicted RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 ATG4CQ96DT6 458 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 ZNF512BQ96KM6 892 aaPredicted RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 THEGQ9P2T0 379 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
HPS4-207ENST00000459918 GBF1Q92538 1859 aa9.55□□□□□ -0.88
HPS4-207ENST00000459918 KIAA0355O15063 1070 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 SLC25A27O95847 323 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 ITGB8P26012 769 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 GUCY1A2P33402 732 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 ACLYP53396 1101 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 TTF1Q15361 905 aaPredicted RBP9.54□□□□□ -0.88
HPS4-207ENST00000459918 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 AACSQ86V21 672 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 CLEC10AQ8IUN9 316 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 SDR42E1Q8WUS8 393 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 GLT1D1Q96MS3 346 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
HPS4-207ENST00000459918 PRDM12Q9H4Q4 367 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 ANTXR1Q9H6X2 564 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 SWAP70Q9UH65 585 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 TNNQ9UQP3 1299 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
HPS4-207ENST00000459918 WDR46O15213 610 aaKnown RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 PPIGQ13427 754 aaKnown RBP eCLIP9.53□□□□□ -0.881e-8■■■□□ 15.8
HPS4-207ENST00000459918 TMEM132BQ14DG7 1078 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 ITPRIPQ8IWB1 547 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 TRMT2AQ8IZ69 625 aaKnown RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 TMEM199Q8N511 208 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 ADAMTS19Q8TE59 1207 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 DDX11Q96FC9 970 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 DNAJC2Q99543 621 aaKnown RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.53□□□□□ -0.887e-8■■□□□ 14.2
HPS4-207ENST00000459918 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 MTIF3Q9H2K0 278 aaKnown RBP9.53□□□□□ -0.88
HPS4-207ENST00000459918 VCPKMTQ9H867 229 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 SPC25Q9HBM1 224 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 RAPGEFL1Q9UHV5 662 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 MSRAQ9UJ68 235 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 SYNRGQ9UMZ2 1314 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 TTC28Q96AY4 2481 aa9.53□□□□□ -0.88
HPS4-207ENST00000459918 MOXD2PA6NHM9 499 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 TIMP1P01033 207 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 C6orf222P0C671 652 aaPredicted RBP9.52□□□□□ -0.89
HPS4-207ENST00000459918 CYP2D6P10635 497 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 AKR1B1P15121 316 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.89
HPS4-207ENST00000459918 COPB2P35606 906 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 STAT3P40763 770 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 ATP8B2P98198 1209 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 FAAP100Q0VG06 881 aa9.52□□□□□ -0.89
HPS4-207ENST00000459918 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
HPS4-207ENST00000459918 ZKSCAN2Q63HK3 967 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms