RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	PRDM12	Q9H4Q4	367 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	SH2D4A	Q9H788	454 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	STARD7	Q9NQZ5	370 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	FPGT-TNNI3K	V9GXZ4	949 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	NCAPG2	Q86XI2	1143 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	RIOX2	Q8IUF8	465 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	TMEM199	Q8N511	208 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	HCN4	Q9Y3Q4	1203 aa		11.06	□□□□□ -0.64
MKLN1-206	ENST00000458153	SYNRG	Q9UMZ2	1314 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	WDR46	O15213	610 aa	Known RBP	11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	ADGRE1	Q14246	886 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	SEPT2	Q15019	361 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	TMEM179	Q6ZVK1	233 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	UPF3A	Q9H1J1	476 aa	Known RBP	11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	SNRK	Q9NRH2	765 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	ADAMTS5	Q9UNA0	930 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	GREB1L	Q9C091	1923 aa	Predicted RBP	11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	PGK1	P00558	417 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	CDK7	P50613	346 aa		11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153	TRMT2A	Q8IZ69	625 aa	Known RBP	11.05	□□□□□ -0.64
MKLN1-206	ENST00000458153		A0A0U1RQG5	324 aa	Predicted RBP	11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	TLR3	O15455	904 aa	Known RBP	11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	GNAI2	P04899	355 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	ZAP70	P43403	619 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	CCDC129	Q6ZRS4	1044 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	ATG4C	Q96DT6	458 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	DBNDD2	Q9BQY9	259 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	SEZ6L	Q9BYH1	1024 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	ARHGEF10L	Q9HCE6	1279 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	IL23A	Q9NPF7	189 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	SWAP70	Q9UH65	585 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	CNPY2	Q9Y2B0	182 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153		A0A1W2PRG0	241 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	PBX2	P40425	430 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	NKX3-2	P78367	333 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	POLA2	Q14181	598 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	KCTD2	Q14681	263 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	C16orf59	Q7L2K0	433 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	FAM184B	Q9ULE4	1060 aa		11.04	□□□□□ -0.64
MKLN1-206	ENST00000458153	DUSP11	O75319	330 aa	Known RBP	11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	FLOT1	O75955	427 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	BMP1	P13497	986 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	POU3F3	P20264	500 aa	Predicted RBP	11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	PLS1	Q14651	629 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	PCSK9	Q8NBP7	692 aa	Known RBP	11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	VCPKMT	Q9H867	229 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	TMX2	Q9Y320	296 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	TMEM132B	Q14DG7	1078 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	MAMDC4	Q6UXC1	1216 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	PPM1E	Q8WY54	764 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	GLT1D1	Q96MS3	346 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	NKX2-4	Q9H2Z4	354 aa		11.03	□□□□□ -0.64
MKLN1-206	ENST00000458153	TCF20	Q9UGU0	1960 aa	Known RBP	11.02	□□□□□ -0.64
MKLN1-206	ENST00000458153	ARVCF	O00192	962 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	ERC2	O15083	957 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	POLR3D	P05423	398 aa	Predicted RBP	11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	TAL1	P17542	331 aa	Predicted RBP	11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	KIAA1755	Q5JYT7	1200 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	ZNF365	Q70YC5	407 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	FAM126B	Q8IXS8	530 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	FAM9B	Q8IZU0	186 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	MAGEB6	Q8N7X4	407 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	RIOK1	Q9BRS2	568 aa	Known RBP	11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	NCOR1	O75376	2440 aa		11.02	□□□□□ -0.65
MKLN1-206	ENST00000458153	PNMA6E	A0A0J9YXQ4	647 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	PLCD1	P51178	756 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	KCNA10	Q16322	511 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	MIGA1	Q8NAN2	632 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	PCDHA11	Q9Y5I1	949 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	IDH1	O75874	414 aa	Known RBP	11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	CD4	P01730	458 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	CSF2RA	P15509	400 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	GJA9	P57773	515 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	REPS2	Q8NFH8	660 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	SPC25	Q9HBM1	224 aa		11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	COL4A4	P53420	1690 aa	Predicted RBP	11.01	□□□□□ -0.65
MKLN1-206	ENST00000458153	GRXCR1	A8MXD5	290 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	MPHOSPH10	O00566	681 aa	Known RBP	11	□□□□□ -0.65
MKLN1-206	ENST00000458153	IGFBP4	P22692	258 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	ICA1	Q05084	483 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	CCDC17	Q96LX7	622 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	LRFN3	Q9BTN0	628 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	SLC28A3	Q9HAS3	691 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	DBNL	Q9UJU6	430 aa	Known RBP	11	□□□□□ -0.65
MKLN1-206	ENST00000458153	PPP1R9A	Q9ULJ8	1098 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	COG5	Q9UP83	839 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	YBX2	Q9Y2T7	364 aa	Known RBP	11	□□□□□ -0.65
MKLN1-206	ENST00000458153	MCM3AP	O60318	1980 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	TANC1	Q9C0D5	1861 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	PGK2	P07205	417 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	SLC43A3	Q8NBI5	491 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	SSH3	Q8TE77	659 aa		11	□□□□□ -0.65
MKLN1-206	ENST00000458153	LENG1	Q96BZ8	264 aa	Predicted RBP	11	□□□□□ -0.65
MKLN1-206	ENST00000458153	ZNF214	Q9UL59	606 aa	Predicted RBP	11	□□□□□ -0.65
MKLN1-206	ENST00000458153	NOP58	Q9Y2X3	529 aa	Known RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms