RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ATL3Q6DD88 541 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 MIER3Q7Z3K6 550 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 KRT25Q7Z3Z0 450 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 TMTC1Q8IUR5 882 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 IP6K1Q92551 441 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 TUBB4BP68371 445 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 RIOK1Q9BRS2 568 aaKnown RBP21.68■■□□□ 1.06
SNX27-204ENST00000458013 LLPHQ9BRT6 129 aaKnown RBP21.68■■□□□ 1.06
SNX27-204ENST00000458013 KRIT1O00522 736 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 CASP2P42575 452 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 PANK4Q9NVE7 773 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 CPSF2Q9P2I0 782 aaKnown RBP21.68■■□□□ 1.06
SNX27-204ENST00000458013 CLIC4Q9Y696 253 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 GIGYF1O75420 1035 aaPredicted RBP21.68■■□□□ 1.06
SNX27-204ENST00000458013 GTF2IP78347 998 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 LLGL1Q15334 1064 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 CAPN7Q9Y6W3 813 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 NSMCE1Q8WV22 266 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 GLG1Q92896 1179 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 TRPC6Q9Y210 931 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 K7ENM7 598 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 GYG1P46976 350 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 AFAP1L2Q8N4X5 818 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 AMFRQ9UKV5 643 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 PPP1R12AO14974 1030 aaPredicted RBP21.67■■□□□ 1.06
SNX27-204ENST00000458013 RGS16O15492 202 aaPredicted RBP21.67■■□□□ 1.06
SNX27-204ENST00000458013 KCNQ3O43525 872 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 SLC12A2P55011 1212 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 RNF10Q8N5U6 811 aaKnown RBP21.67■■□□□ 1.06
SNX27-204ENST00000458013 APOL6Q9BWW8 343 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 ANKFY1Q9P2R3 1169 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 STAM2O75886 525 aa21.67■■□□□ 1.06
SNX27-204ENST00000458013 POLR2FP61218 127 aaKnown RBP21.67■■□□□ 1.06
SNX27-204ENST00000458013 SMAP1Q8IYB5 467 aaPredicted RBP21.66■■□□□ 1.06
SNX27-204ENST00000458013 SYCE1Q8N0S2 351 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 GAS7O60861 476 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 BCL2L12Q9HB09 334 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 PLCB1Q9NQ66 1216 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 SMYD2Q9NRG4 433 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 FLOT1O75955 427 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 MUM1Q2TAK8 710 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 A0A0D9SFI3 127 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 TTBK2Q6IQ55 1244 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 DACT3Q96B18 629 aaPredicted RBP21.66■■□□□ 1.06
SNX27-204ENST00000458013 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
SNX27-204ENST00000458013 LPIN2Q92539 896 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 RAB20Q9NX57 234 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 IMPACTQ9P2X3 320 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 SEC31AO94979 1220 aaKnown RBP21.65■■□□□ 1.06
SNX27-204ENST00000458013 BCAMP50895 628 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 TSNAXIP1Q2TAA8 658 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 ZMYND10O75800 440 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 KBTBD3Q8NAB2 608 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 H0YIN7 160 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 ALAS1P13196 640 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 DNAJC10Q8IXB1 793 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 DEPTORQ8TB45 409 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 PGBD1Q96JS3 809 aa21.65■■□□□ 1.06
SNX27-204ENST00000458013 KCNA6P17658 529 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 CACNB1Q02641 598 aaPredicted RBP21.64■■□□□ 1.06
SNX27-204ENST00000458013 RIPOR2Q9Y4F9 1068 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 OPHN1O60890 802 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 SLC4A1P02730 911 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 KCTD16Q68DU8 428 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 RUFY4Q6ZNE9 571 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 POTEDQ86YR6 584 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 ORAI2Q96SN7 254 aa21.64■■□□□ 1.06
SNX27-204ENST00000458013 DNM2P50570 870 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 SAR1BQ9Y6B6 198 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 CNGA1P29973 690 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 GADL1Q6ZQY3 521 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 NME8Q8N427 588 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 ENC1O14682 589 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 PPP1R2P41236 205 aa21.64■■□□□ 1.05
SNX27-204ENST00000458013 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.64■■□□□ 1.05
SNX27-204ENST00000458013 SKA2Q8WVK7 121 aaPredicted RBP21.63■■□□□ 1.05
SNX27-204ENST00000458013 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 M0QZ92 97 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 ZNF853P0CG23 659 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 IL13P35225 146 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 ANKRD13CQ8N6S4 541 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 PPP1R16BQ96T49 567 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 ARHGAP6O43182 974 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 RPS6KA2Q15349 733 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 RSPH3Q86UC2 560 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 REXO1Q8N1G1 1221 aaKnown RBP21.63■■□□□ 1.05
SNX27-204ENST00000458013 TPCN1Q9ULQ1 816 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 ANKRD20A3Q5VUR7 823 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 POMGNT1Q8WZA1 660 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 PALD1Q9ULE6 856 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 SNX1Q13596 522 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 CEP128Q6ZU80 1094 aa21.63■■□□□ 1.05
SNX27-204ENST00000458013 ZSCAN10Q96SZ4 725 aaPredicted RBP21.63■■□□□ 1.05
SNX27-204ENST00000458013 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms