RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LPAR1Q92633 364 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 HOXC10Q9NYD6 342 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 FLOT1O75955 427 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 PLS1Q14651 629 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 CTR9Q6PD62 1173 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 NPLOC4Q8TAT6 608 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 APPBP2Q92624 585 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 A0A0G2JMZ2 1700 aa18.86■□□□□ 0.61
CHCHD3-204ENST00000457942 SLC15A5A6NIM6 579 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 DNM1LO00429 736 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 ERC2O15083 957 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 RNF113AO15541 343 aaKnown RBP18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 APPP05067 770 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 PTPREP23469 700 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 TDO2P48775 406 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 STRBPQ96SI9 672 aaKnown RBP18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 VCPKMTQ9H867 229 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
CHCHD3-204ENST00000457942 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 GPAA1O43292 621 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 TRIM60Q495X7 471 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 BADQ92934 168 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 OSBP2Q969R2 916 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 KANSL2Q9H9L4 492 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 MKNK2Q9HBH9 465 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 GOPCQ9HD26 462 aa18.84■□□□□ 0.61
CHCHD3-204ENST00000457942 RLFQ13129 1914 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 WDR46O15213 610 aaKnown RBP18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 FOSL2P15408 326 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 GRB14Q14449 540 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 DPP9Q86TI2 863 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 MB21D1Q8N884 522 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 FERMT2Q96AC1 680 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 ATG4CQ96DT6 458 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 FSD1Q9BTV5 496 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 SPATC1LQ9H0A9 340 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 TTYH1Q9H313 450 aaPredicted RBP18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 PARP14Q460N5 1801 aa18.83■□□□□ 0.6
CHCHD3-204ENST00000457942 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 M0R2C6 588 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 CYBAP13498 195 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 GNAT2P19087 354 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 DSG3P32926 999 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 NCAPG2Q86XI2 1143 aa18.82■□□□□ 0.6
CHCHD3-204ENST00000457942 COL11A1P12107 1806 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 MSCO60682 206 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 ERCC3P19447 782 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 MX1P20591 662 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 SBK1Q52WX2 424 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 SH3RF1Q7Z6J0 888 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 SIAH1Q8IUQ4 282 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 CRBNQ96SW2 442 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 PRDM6Q9NQX0 595 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 PDLIM7Q9NR12 457 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 ZNF236Q9UL36 1845 aa18.81■□□□□ 0.6
CHCHD3-204ENST00000457942 ADORA2AP29274 412 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 SLC39A5Q6ZMH5 540 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 SHCBP1Q8NEM2 672 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 NACAP1Q9BZK3 213 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 ZNF287Q9HBT7 754 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 MYH4Q9Y623 1939 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
CHCHD3-204ENST00000457942 ADCYAP1R1P41586 468 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 PRAMEF19Q5SWL8 479 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 FAM83BQ5T0W9 1011 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 MROH8Q9H579 483 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 SLC5A4Q9NY91 659 aa18.79■□□□□ 0.6
CHCHD3-204ENST00000457942 TRIM43BA6NCK2 446 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 STRNO43815 780 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 HOXC6P09630 235 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 RASA1P20936 1047 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 ANKRD45Q5TZF3 282 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 TRIM43Q96BQ3 446 aaPredicted RBP18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 NAPBQ9H115 298 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
CHCHD3-204ENST00000457942 PRDM1O75626 825 aa18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 FAM47AQ5JRC9 791 aa18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 ZNF444Q8N0Y2 327 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 RNPC3Q96LT9 517 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 SEC62Q99442 399 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-204ENST00000457942 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 SLC25A27O95847 323 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 FCER1AP12319 257 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms