RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ENOX1Q8TC92 643 aaKnown RBP4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 APPBP2Q92624 585 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 NECAB3Q96P71 396 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 RSPH9Q9H1X1 276 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 FRMD4BQ9Y2L6 1034 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 CCDC163A0A0D9SF12 145 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 BIN1O00499 593 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 ENC1O14682 589 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 RNGTTO60942 597 aaKnown RBP4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 LEFTY1O75610 366 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 GSTT1P30711 240 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 NTF4P34130 210 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 CCDC96Q2M329 555 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 L1TD1Q5T7N2 865 aaKnown RBP4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 PPP4R4Q6NUP7 873 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 ATG4DQ86TL0 474 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 DRC7Q8IY82 874 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 CHPFQ8IZ52 775 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 PAF1Q8N7H5 531 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 SH3TC2Q8TF17 1288 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 CDC5LQ99459 802 aaKnown RBP4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 CEP44Q9C0F1 390 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 TNKS2Q9H2K2 1166 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 KANSL2Q9H9L4 492 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 SNTG2Q9NY99 539 aa4.94□□□□□ -1.62
HMGB3P30-201ENST00000457863 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 FAM221BA6H8Z2 402 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 IGF2BP3O00425 579 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 TRIM37O94972 964 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 CTSHP09668 335 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 CD8BP10966 210 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 EPHB1P54762 984 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 JAG1P78504 1218 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 RING1Q06587 406 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 BNIP3Q12983 259 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 INO80DQ53TQ3 878 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 C10orf62Q5T681 223 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 KRT26Q7Z3Y9 468 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 TOP6BLQ8N6T0 577 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 ACSBG1Q96GR2 724 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 HRASLS5Q96KN8 279 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 IFT122Q9HBG6 1241 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 ZNF69Q9UC07 566 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 LZTS1Q9Y250 596 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 AKAP2Q9Y2D5 859 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 SAMM50Q9Y512 469 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 NUB1Q9Y5A7 615 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 SNX11Q9Y5W9 270 aa4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P30-201ENST00000457863 BICDL2A1A5D9 508 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 TTC36A6NLP5 189 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 GIPC1O14908 333 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 NPHP1O15259 732 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 FANCGO15287 622 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 ALDH1L1O75891 902 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 C8AP07357 584 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 RNASE1P07998 156 aaKnown RBP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 BMP6P22004 513 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 POLD1P28340 1107 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 CDKN1CP49918 316 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 ATP2B2Q01814 1243 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 PAK2Q13177 524 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 FZD5Q13467 585 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 RASA3Q14644 834 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 CASC1Q6TDU7 716 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 HOMER1Q86YM7 354 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 JAMLQ86YT9 394 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 FTSJ3Q8IY81 847 aaKnown RBP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 IFNL3Q8IZI9 196 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 DEPDC7Q96QD5 511 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 TSPAN18Q96SJ8 248 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 SETDB2Q96T68 719 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 RC3H2Q9HBD1 1191 aaKnown RBP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 MBNL3Q9NUK0 354 aaKnown RBP4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 ADAMTS6Q9UKP5 1117 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 PLAGL2Q9UPG8 496 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 ATP8A1Q9Y2Q0 1164 aa4.92□□□□□ -1.62
HMGB3P30-201ENST00000457863 SETD1BQ9UPS6 1966 aaKnown RBP4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 CARMIL2Q6F5E8 1435 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 ESYT3A0FGR9 886 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 KLF4O43474 513 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 DHX16O60231 1041 aaKnown RBP4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 PAGE1O75459 146 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 GNA15P30679 374 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 TRAPPC10P48553 1259 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 RAB33AQ14088 237 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 MORC3Q14149 939 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 SIM2Q14190 667 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 PPM1JQ5JR12 505 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 ANGEL2Q5VTE6 544 aaKnown RBP4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 ALG1LQ6GMV1 187 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 LLGL2Q6P1M3 1020 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 ARHGAP27Q6ZUM4 889 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 C16orf86Q6ZW13 317 aa4.91□□□□□ -1.62
HMGB3P30-201ENST00000457863 FAM214BQ7L5A3 538 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms