RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 INPP5BP32019 993 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 MAP3K10Q02779 954 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
RIF1-208ENST00000457745 NPY5RQ15761 445 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
RIF1-208ENST00000457745 CLEC17AQ6ZS10 378 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 FOXP4Q8IVH2 680 aaPredicted RBP10.18□□□□□ -0.78
RIF1-208ENST00000457745 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 NUP88Q99567 741 aaPredicted RBP10.18□□□□□ -0.78
RIF1-208ENST00000457745 DEFB129Q9H1M3 183 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 KAT14Q9H8E8 782 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.18□□□□□ -0.78
RIF1-208ENST00000457745 TMOD2Q9NZR1 351 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 KCNJ14Q9UNX9 436 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 CNPY2Q9Y2B0 182 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 SMCHD1A6NHR9 2005 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 STK36Q9NRP7 1315 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 ERICH2A1L162 156 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 WNT7AO00755 349 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 TOP1P11387 765 aaKnown RBP10.17□□□□□ -0.78
RIF1-208ENST00000457745 NUCB2P80303 420 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 ABCB5Q2M3G0 1257 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 CATIPQ7Z7H3 387 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
RIF1-208ENST00000457745 ALG1Q9BT22 464 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 ZBTB21Q9ULJ3 1066 aa10.17□□□□□ -0.78
RIF1-208ENST00000457745 WDR33Q9C0J8 1336 aaKnown RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 H7C1D1 291 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 CPLX1O14810 134 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 PPP1R11O60927 126 aaPredicted RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 GADD45BO75293 160 aaPredicted RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 RCAN1P53805 252 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 SNAP25P60880 206 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 ATP2B2Q01814 1243 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 EARS2Q5JPH6 523 aaKnown RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 KRT40Q6A162 431 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 MOB2Q70IA6 237 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
RIF1-208ENST00000457745 GPCPD1Q9NPB8 672 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 VPS54Q9P1Q0 977 aa10.16□□□□□ -0.78
RIF1-208ENST00000457745 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
RIF1-208ENST00000457745 SCN4AP35499 1836 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 PARP14Q460N5 1801 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 TBC1D12O60347 775 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 NDUFB10O96000 172 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 SLC16A2P36021 539 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 HMGN5P82970 282 aaKnown RBP10.15□□□□□ -0.78
RIF1-208ENST00000457745 KIF23Q02241 960 aaPredicted RBP10.15□□□□□ -0.78
RIF1-208ENST00000457745 ICA1Q05084 483 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
RIF1-208ENST00000457745 MCTP1Q6DN14 999 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 FBXO18Q8NFZ0 1043 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 ADARB2Q9NS39 739 aaKnown RBP10.15□□□□□ -0.78
RIF1-208ENST00000457745 LMBRD1Q9NUN5 540 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 HERC5Q9UII4 1024 aaKnown RBP10.15□□□□□ -0.78
RIF1-208ENST00000457745 SRCAPQ6ZRS2 3230 aa10.15□□□□□ -0.78
RIF1-208ENST00000457745 RLFQ13129 1914 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 GLTPD2A6NH11 291 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 MYO1BO43795 1136 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 TTLL1O95922 423 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 EPHX2P34913 555 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 CAP2P40123 477 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 ZNF543Q08ER8 600 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 PRKG1Q13976 671 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 SYNE3Q6ZMZ3 975 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 TMEM179Q6ZVK1 233 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 FAM184AQ8NB25 1140 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 CTCFLQ8NI51 663 aaPredicted RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 ZKSCAN4Q969J2 545 aaPredicted RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 MKL1Q969V6 931 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 CCDC17Q96LX7 622 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 PIGSQ96S52 555 aa10.14□□□□□ -0.79
RIF1-208ENST00000457745 RNF26Q9BY78 433 aaPredicted RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 TAF1DQ9H5J8 278 aaPredicted RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 TFIP11Q9UBB9 837 aaKnown RBP10.14□□□□□ -0.79
RIF1-208ENST00000457745 PTPRFP10586 1907 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 KLRF2D3W0D1 207 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 CALM1P0DP23 149 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 CALM2P0DP24 149 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 CALM3P0DP25 149 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 NR5A1Q13285 461 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 ZYXQ15942 572 aaKnown RBP10.13□□□□□ -0.79
RIF1-208ENST00000457745 SLFN13Q68D06 897 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 SPICE1Q8N0Z3 855 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 GPT2Q8TD30 523 aa10.13□□□□□ -0.79
RIF1-208ENST00000457745 USP28Q96RU2 1077 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms