RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 MOV10L1Q9BXT6 1211 aaKnown RBP19.25■□□□□ 0.67
CPSF6-203ENST00000456847 FBXO28Q9NVF7 368 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 MTMR4Q9NYA4 1195 aa19.25■□□□□ 0.67
CPSF6-203ENST00000456847 SLC15A5A6NIM6 579 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 F5H6K3 240 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 NDUFB10O96000 172 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
CPSF6-203ENST00000456847 PTPREP23469 700 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 KLRC3Q07444 240 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 CWC27Q6UX04 472 aaKnown RBP19.24■□□□□ 0.67
CPSF6-203ENST00000456847 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
CPSF6-203ENST00000456847 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■□□ 15.6
CPSF6-203ENST00000456847 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
CPSF6-203ENST00000456847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
CPSF6-203ENST00000456847 ZNF236Q9UL36 1845 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 LAMA4Q16363 1823 aa19.24■□□□□ 0.67
CPSF6-203ENST00000456847 PDE4AP27815 886 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 TRIM32Q13049 653 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 NCAPG2Q86XI2 1143 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 DEFB118Q96PH6 123 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 ANAPC4Q9UJX5 808 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
CPSF6-203ENST00000456847 FGAP02671 866 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 PPP4R3BQ5MIZ7 849 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 SHCBP1Q8NEM2 672 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 USP6NLQ92738 828 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 HMX1Q9NP08 348 aaPredicted RBP19.23■□□□□ 0.67
CPSF6-203ENST00000456847 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 PPP1R9AQ9ULJ8 1098 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 PDE4DIPQ5VU43 2346 aa19.23■□□□□ 0.67
CPSF6-203ENST00000456847 ERCC3P19447 782 aa19.22■□□□□ 0.67
CPSF6-203ENST00000456847 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
CPSF6-203ENST00000456847 SLF1Q9BQI6 1058 aa19.22■□□□□ 0.67
CPSF6-203ENST00000456847 TNRC18O15417 2968 aaPredicted RBP19.22■□□□□ 0.67
CPSF6-203ENST00000456847 RPTORQ8N122 1335 aa19.22■□□□□ 0.67
CPSF6-203ENST00000456847 SGPL1O95470 568 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 TFRCP02786 760 aaKnown RBP19.21■□□□□ 0.67
CPSF6-203ENST00000456847 PRKAR2AP13861 404 aaKnown RBP19.21■□□□□ 0.67
CPSF6-203ENST00000456847 HAND2P61296 217 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 GRB14Q14449 540 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 CCL14Q16627 93 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 PAK6Q9NQU5 681 aaPredicted RBP19.21■□□□□ 0.67
CPSF6-203ENST00000456847 SYNPO2Q9UMS6 1093 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 CTDP1Q9Y5B0 961 aaPredicted RBP19.21■□□□□ 0.67
CPSF6-203ENST00000456847 TMEM132BQ14DG7 1078 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 MKL1Q969V6 931 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 MROH8Q9H579 483 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 STX8Q9UNK0 236 aa19.21■□□□□ 0.67
CPSF6-203ENST00000456847 ORC4O43929 436 aa19.2■□□□□ 0.66
CPSF6-203ENST00000456847 PRPF38BQ5VTL8 546 aaKnown RBP19.2■□□□□ 0.66
CPSF6-203ENST00000456847 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
CPSF6-203ENST00000456847 DPP9Q86TI2 863 aa19.2■□□□□ 0.66
CPSF6-203ENST00000456847 GMCL1P1Q8NEA9 526 aa19.2■□□□□ 0.66
CPSF6-203ENST00000456847 VWA5AO00534 786 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 FARP2O94887 1054 aaPredicted RBP19.19■□□□□ 0.66
CPSF6-203ENST00000456847 SLC25A27O95847 323 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 STRNO43815 780 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
CPSF6-203ENST00000456847 ADORA2AP29274 412 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 MFSD14CQ5VZR4 134 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
CPSF6-203ENST00000456847 ZNFX1Q9P2E3 1918 aaKnown RBP19.18■□□□□ 0.66
CPSF6-203ENST00000456847 NMT2O60551 498 aa19.18■□□□□ 0.66
CPSF6-203ENST00000456847 BMP3P12645 472 aa19.18■□□□□ 0.66
CPSF6-203ENST00000456847 PRPF38AQ8NAV1 312 aaKnown RBP19.18■□□□□ 0.66
CPSF6-203ENST00000456847 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
CPSF6-203ENST00000456847 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
CPSF6-203ENST00000456847 CAPN2P17655 700 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 COPB2P35606 906 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 STAT3P40763 770 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 CACNB2Q08289 660 aaPredicted RBP19.17■□□□□ 0.66
CPSF6-203ENST00000456847 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
CPSF6-203ENST00000456847 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 MFSD6Q6ZSS7 791 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 RIOX2Q8IUF8 465 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 NPLOC4Q8TAT6 608 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 SLC5A4Q9NY91 659 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 MTMR7Q9Y216 660 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 PLXNA1Q9UIW2 1896 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 ZBED4O75132 1171 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 HOXC6P09630 235 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 FCER1AP12319 257 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 SLC4A3P48751 1232 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 AKNAD1Q5T1N1 836 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 MMP19Q99542 508 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 RNF41Q9H4P4 317 aaPredicted RBP19.17■□□□□ 0.66
CPSF6-203ENST00000456847 IL17RBQ9NRM6 502 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 FLRT1Q9NZU1 646 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 ZNF214Q9UL59 606 aaPredicted RBP19.17■□□□□ 0.66
CPSF6-203ENST00000456847 FRMPD3Q5JV73 1810 aa19.17■□□□□ 0.66
CPSF6-203ENST00000456847 ZNF213O14771 459 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 FGRP09769 529 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 SLC1A4P43007 532 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 TBC1D10CQ8IV04 446 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 REPS2Q8NFH8 660 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 STAG1Q8WVM7 1258 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms