RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ADCYAP1R1P41586 468 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 HSP90AB4PQ58FF6 505 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 TRIM43Q96BQ3 446 aaPredicted RBP14.38□□□□□ -0.11
LMCD1-206ENST00000456506 KIF1BPQ96EK5 621 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 DNAJC2Q99543 621 aaKnown RBP14.38□□□□□ -0.11
LMCD1-206ENST00000456506 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 FBXO28Q9NVF7 368 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 PHF24Q9UPV7 400 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 MUC3AQ02505 3323 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 MBD4O95243 580 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 CDK8P49336 464 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
LMCD1-206ENST00000456506 ICA1Q05084 483 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 ZNF792Q3KQV3 632 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 NCAPG2Q86XI2 1143 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
LMCD1-206ENST00000456506 CLASRPQ8N2M8 674 aaKnown RBP14.37□□□□□ -0.11
LMCD1-206ENST00000456506 BADQ92934 168 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 FAM161BQ96MY7 647 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 ARHGEF10LQ9HCE6 1279 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 PAG1Q9NWQ8 432 aa14.37□□□□□ -0.11
LMCD1-206ENST00000456506 ZNF214Q9UL59 606 aaPredicted RBP14.37□□□□□ -0.11
LMCD1-206ENST00000456506 KBTBD13C9JR72 458 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 EEF2P13639 858 aaKnown RBP14.36□□□□□ -0.11
LMCD1-206ENST00000456506 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-206ENST00000456506 ATP5JP18859 108 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 RPAP2Q8IXW5 612 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-206ENST00000456506 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 HAUS7Q99871 368 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 TTYH1Q9H313 450 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-206ENST00000456506 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
LMCD1-206ENST00000456506 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 USP17L21D6R901 530 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 VWA5AO00534 786 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 SLC25A27O95847 323 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 PGK2P07205 417 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-206ENST00000456506 FCER1AP12319 257 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 EPHB4P54760 987 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 PLS1Q14651 629 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 CDX2Q99626 313 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-206ENST00000456506 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 BOLA2Q9H3K6 86 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 DIS3Q9Y2L1 958 aaKnown RBP14.35□□□□□ -0.11
LMCD1-206ENST00000456506 REV3LO60673 3130 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 CHD9Q3L8U1 2897 aa14.35□□□□□ -0.11
LMCD1-206ENST00000456506 APBB1O00213 710 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 ADAMTS4O75173 837 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
LMCD1-206ENST00000456506 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
LMCD1-206ENST00000456506 TLE2Q04725 743 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 ZNF697Q5TEC3 545 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 CTR9Q6PD62 1173 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 MMP19Q99542 508 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 PRDM5Q9NQX1 630 aaPredicted RBP14.34□□□□□ -0.11
LMCD1-206ENST00000456506 SLC5A4Q9NY91 659 aa14.34□□□□□ -0.11
LMCD1-206ENST00000456506 DNAJC25-GNG10A0A024R161 153 aa14.33□□□□□ -0.12
LMCD1-206ENST00000456506 KIAA0355O15063 1070 aa14.33□□□□□ -0.12
LMCD1-206ENST00000456506 RAB11FIP3O75154 756 aa14.33□□□□□ -0.12
LMCD1-206ENST00000456506 PGK1P00558 417 aa14.33□□□□□ -0.12
LMCD1-206ENST00000456506 CCSAPQ6IQ19 270 aaPredicted RBP14.33□□□□□ -0.12
LMCD1-206ENST00000456506 LENG1Q96BZ8 264 aaPredicted RBP14.33□□□□□ -0.12
LMCD1-206ENST00000456506 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
LMCD1-206ENST00000456506 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
LMCD1-206ENST00000456506 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
LMCD1-206ENST00000456506 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 RASA1P20936 1047 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 STAT3P40763 770 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 COG6Q9Y2V7 657 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 SYNRGQ9UMZ2 1314 aa14.32□□□□□ -0.12
LMCD1-206ENST00000456506 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 ADCY6O43306 1168 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
LMCD1-206ENST00000456506 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
LMCD1-206ENST00000456506 CLTBP09497 229 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 RARBP10826 455 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 MAMDC4Q6UXC1 1216 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
LMCD1-206ENST00000456506 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 MIER1Q8N108 512 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 FGD4Q96M96 766 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.31□□□□□ -0.12
LMCD1-206ENST00000456506 DDX19BQ9UMR2 479 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 TACC3Q9Y6A5 838 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 SLC4A4Q9Y6R1 1079 aa14.31□□□□□ -0.12
LMCD1-206ENST00000456506 ATP2A1O14983 1001 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms