RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HYOU1Q9Y4L1 999 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CACNA1DQ01668 2161 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 H7C1D1 291 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 C6orf118Q5T5N4 469 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 IFIH1Q9BYX4 1025 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 STK17AQ9UEE5 414 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 RNF17Q9BXT8 1623 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TARSL2A2RTX5 802 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ATP6V1E1P36543 226 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TBCCQ15814 346 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ANKLE2Q86XL3 938 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 MICAL1Q8TDZ2 1067 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 BPIFA3Q9BQP9 254 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 IGSF22Q8N9C0 903 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 APBB2Q92870 758 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 OSBPL9Q96SU4 736 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TRIOBPQ9H2D6 2365 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 NUTM2FA1L443 756 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 METTL24Q5JXM2 366 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ANKRD35Q8N283 1001 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 NYXQ9GZU5 481 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 PEX19P40855 299 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 USP48Q86UV5 1035 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CDCA7Q9BWT1 371 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 RNF123Q5XPI4 1314 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 FANCAO15360 1455 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 NSMCE1Q8WV22 266 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 MEIS1O00470 390 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ATP5BP06576 529 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 STX17P56962 302 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CABP4P57796 275 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 COG7P83436 770 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 FLOT2Q14254 428 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC89Q8N998 374 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CABP5Q9NP86 173 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ANGEL1Q9UNK9 670 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 PIKFYVEQ9Y2I7 2098 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ZEB2O60315 1214 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 APOA1P02647 267 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 HSPA13P48723 471 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 SLC12A2P55011 1212 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 BANK1Q8NDB2 785 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ESYT1Q9BSJ8 1104 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 NOP53Q9NZM5 478 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ZRANB1Q9UGI0 708 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ADCY2Q08462 1091 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TSC22D1Q15714 1073 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ZNF280CQ8ND82 737 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 TMX3Q96JJ7 454 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC138Q96M89 665 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 OLFML3Q9NRN5 406 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ARAP3Q8WWN8 1544 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGAP42A6NI28 874 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 USP6NLQ92738 828 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 CCPG1Q9ULG6 757 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 QRICH2Q9H0J4 1663 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 SOX12O15370 315 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGEF9O43307 516 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 CRCPO75575 148 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 PCSK2P16519 638 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 PPARGP37231 505 aaPredicted RBP5.71□□□□□ -1.49
CSMD3-204ENST00000455883 ADRM1Q16186 407 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 TCERG1LQ5VWI1 586 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 ATG16L1Q676U5 607 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 CDC37L1Q7L3B6 337 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 CTAGE3PQ8IX95 158 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 CAPS2Q9BXY5 557 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 WDR19Q8NEZ3 1342 aa5.71□□□□□ -1.49
CSMD3-204ENST00000455883 TSPY2A6NKD2 308 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 E7EVH7 732 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 PODXLO00592 558 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TSPY3P0CV98 308 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TSPY8P0CW00 308 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TSPY1Q01534 308 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 PBKQ96KB5 322 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 GSDMAQ96QA5 445 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 RBSNQ9H1K0 784 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 PACSIN2Q9UNF0 486 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CACNA1IQ9P0X4 2223 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CDK12Q9NYV4 1490 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 USP32Q8NFA0 1604 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SNAPC5O75971 98 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 GARSP41250 739 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 RPS6KA1Q15418 735 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 IFIT1BQ5T764 474 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SV2BQ7L1I2 683 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ST13P5Q8NFI4 369 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 FAM210AQ96ND0 272 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CLSTN2Q9H4D0 955 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 UTP6Q9NYH9 597 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms