RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 ABRAQ8N0Z2 381 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 MMP19Q99542 508 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 MCM9Q9NXL9 1143 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 TRANK1O15050 2925 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-204ENST00000454850 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-204ENST00000454850 IGSF3O75054 1194 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 CYP2D6P10635 497 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 GABPAQ06546 454 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 TMEM57Q8N5G2 664 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
CLCN4-204ENST00000454850 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-204ENST00000454850 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
CLCN4-204ENST00000454850 CRNKL1Q9BZJ0 848 aaKnown RBP12.01□□□□□ -0.49
CLCN4-204ENST00000454850 MYH4Q9Y623 1939 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 GRXCR1A8MXD5 290 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 ATP8B2P98198 1209 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 ICA1Q05084 483 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 FAAP100Q0VG06 881 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 TMEM132BQ14DG7 1078 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 SDR42E1Q8WUS8 393 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 GAS2L1Q99501 681 aaPredicted RBP12□□□□□ -0.49
CLCN4-204ENST00000454850 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
CLCN4-204ENST00000454850 TINF2Q9BSI4 451 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 STARD7Q9NQZ5 370 aa12□□□□□ -0.49
CLCN4-204ENST00000454850 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 RAD21O60216 631 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 AKR1A1P14550 325 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 AKR1B1P15121 316 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 PBX2P40425 430 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 KCTD2Q14681 263 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 CCDC85BQ15834 202 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-204ENST00000454850 AACSQ86V21 672 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 DYNLL2Q96FJ2 89 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 PRDM12Q9H4Q4 367 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
CLCN4-204ENST00000454850 ROBO3Q96MS0 1386 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 APBB1O00213 710 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
CLCN4-204ENST00000454850 ADAMTS4O75173 837 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 SLC25A27O95847 323 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 PDE6AP16499 860 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 ACLYP53396 1101 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 SLC9C2Q5TAH2 1124 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 LCORLQ8N3X6 602 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 ADAMTS19Q8TE59 1207 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 SH2D4AQ9H788 454 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 VCPKMTQ9H867 229 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 THEGQ9P2T0 379 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
CLCN4-204ENST00000454850 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-204ENST00000454850 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 TIMP1P01033 207 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
CLCN4-204ENST00000454850 KCNA10Q16322 511 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 ZNF792Q3KQV3 632 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 ANKRD33Q7Z3H0 272 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
CLCN4-204ENST00000454850 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
CLCN4-204ENST00000454850 SWAP70Q9UH65 585 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 EXOC6BQ9Y2D4 811 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
CLCN4-204ENST00000454850 TMX2Q9Y320 296 aa11.97□□□□□ -0.49
CLCN4-204ENST00000454850 CYP2D7A0A087X1C5 515 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 MYADML2A6NDP7 307 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 ACRP10323 421 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 CSF2RAP15509 400 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 IGFBP4P22692 258 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 STAT3P40763 770 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 PPIGQ13427 754 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 TMEM240Q5SV17 173 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 MFSD5Q6N075 450 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 TMED8Q6PL24 325 aaPredicted RBP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 RIOX2Q8IUF8 465 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 ITPRIPQ8IWB1 547 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 ATXN2LQ8WWM7 1075 aaKnown RBP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 ASB2Q96Q27 587 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 UHRF1Q96T88 793 aaPredicted RBP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 DNAJC2Q99543 621 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms