RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 COG2Q14746 738 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 CCDC178Q5BJE1 867 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 C17orf99Q6UX52 265 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 CATSPERGQ6ZRH7 1159 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 RALYLQ86SE5 291 aaKnown RBP8.12□□□□□ -1.11
NCL-206ENST00000454824 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
NCL-206ENST00000454824 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 UBAC1Q9BSL1 405 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 VCPKMTQ9H867 229 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 MTMR4Q9NYA4 1195 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 PHIPQ8WWQ0 1821 aa8.12□□□□□ -1.11
NCL-206ENST00000454824 ERICH2A1L162 156 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 TNPO2O14787 897 aaKnown RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 KDM4AO75164 1064 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 CCNA1P78396 465 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 PTH1RQ03431 593 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 FAM83BQ5T0W9 1011 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 SLFN13Q68D06 897 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 SIAH1Q8IUQ4 282 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 COA7Q96BR5 231 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 C12orf42Q96LP6 360 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 MCOLN1Q9GZU1 580 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
NCL-206ENST00000454824 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 LAMB1P07942 1786 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
NCL-206ENST00000454824 PTPRFP10586 1907 aa8.11□□□□□ -1.11
NCL-206ENST00000454824 CCDC85CA6NKD9 419 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 B4E1Z4 1266 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 NMT2O60551 498 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 ZBED4O75132 1171 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 GNRH1P01148 92 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 BCRP11274 1271 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
NCL-206ENST00000454824 MCCP23508 829 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 SLC1A4P43007 532 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 NT5C2P49902 561 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 SART3Q15020 963 aaKnown RBP8.1□□□□□ -1.11
NCL-206ENST00000454824 FAM110CQ1W6H9 321 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 OTOP1Q7RTM1 612 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 TBC1D10CQ8IV04 446 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 NCOA7Q8NI08 942 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 RAET1EQ8TD07 263 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 MAP4K1Q92918 833 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 MKL1Q969V6 931 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 TTC14Q96N46 770 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 ZKSCAN3Q9BRR0 538 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.1□□□□□ -1.11
NCL-206ENST00000454824 IL25Q9H293 177 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 KAT14Q9H8E8 782 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 RABGAP1Q9Y3P9 1069 aa8.1□□□□□ -1.11
NCL-206ENST00000454824 IGKV6D-41A0A0C4DH26 115 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 IFIT3O14879 490 aaKnown RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 GABBR2O75899 941 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 REC8O95072 547 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 NDUFB10O96000 172 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 FGRP09769 529 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 TOP1P11387 765 aaKnown RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 BMP3P12645 472 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 ATN1P54259 1190 aaPredicted RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 PRMT2P55345 433 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 ERVK-24P63145 666 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 FBXO46Q6PJ61 603 aaPredicted RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 POTEHQ6S545 545 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 MB21D1Q8N884 522 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 PRPF38AQ8NAV1 312 aaKnown RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 GMCL1P1Q8NEA9 526 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 ZSCAN10Q96SZ4 725 aaPredicted RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 NUP88Q99567 741 aaPredicted RBP8.09□□□□□ -1.11
NCL-206ENST00000454824 ARHGAP39Q9C0H5 1083 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 IL17RBQ9NRM6 502 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 TCP11L1Q9NUJ3 509 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 ZSWIM5Q9P217 1185 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 FEM1BQ9UK73 627 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 SYNPO2Q9UMS6 1093 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 MYH4Q9Y623 1939 aa8.09□□□□□ -1.11
NCL-206ENST00000454824 NEDD4P46934 1319 aa8.08□□□□□ -1.12
NCL-206ENST00000454824 TMEM232C9JQI7 657 aa8.08□□□□□ -1.12
NCL-206ENST00000454824 E7EWF7 191 aa8.08□□□□□ -1.12
NCL-206ENST00000454824 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
NCL-206ENST00000454824 EIF5BO60841 1220 aaKnown RBP8.08□□□□□ -1.12
NCL-206ENST00000454824 CYP21A2P08686 494 aa8.08□□□□□ -1.12
NCL-206ENST00000454824 MAPK4P31152 587 aa8.08□□□□□ -1.12
NCL-206ENST00000454824 FGD1P98174 961 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms