RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 RBM8AQ9Y5S9 174 aaKnown RBP16.73■□□□□ 0.27
HDAC4-205ENST00000454542 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 B4E1Z4 1266 aa16.72■□□□□ 0.27
HDAC4-205ENST00000454542 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
HDAC4-205ENST00000454542 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
HDAC4-205ENST00000454542 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
HDAC4-205ENST00000454542 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
HDAC4-205ENST00000454542 KRT23Q9C075 422 aa16.72■□□□□ 0.27
HDAC4-205ENST00000454542 PORCNQ9H237 461 aa16.72■□□□□ 0.27
HDAC4-205ENST00000454542 CENPFP49454 3210 aa16.72■□□□□ 0.27
HDAC4-205ENST00000454542 KDM4AO75164 1064 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
HDAC4-205ENST00000454542 HOXD10P28358 340 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 MAPK4P31152 587 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 IRF5Q13568 498 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 SLFN13Q68D06 897 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 ANKS1AQ92625 1134 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 TTC14Q96N46 770 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 GABRQQ9UN88 632 aa16.71■□□□□ 0.27
HDAC4-205ENST00000454542 PLA2G6O60733 806 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 BMP3P12645 472 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 CCNA1P78396 465 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 SHCBP1Q8NEM2 672 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 SPATC1LQ9H0A9 340 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 GJD2Q9UKL4 321 aa16.7■□□□□ 0.26
HDAC4-205ENST00000454542 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-205ENST00000454542 E7EWF7 191 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 VWA5AO00534 786 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 FLT3LGP49771 235 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 CCDC178Q5BJE1 867 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 USP6NLQ92738 828 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 COA7Q96BR5 231 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
HDAC4-205ENST00000454542 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 FEM1BQ9UK73 627 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 BRCA2P51587 3418 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 TNKSO95271 1327 aa16.69■□□□□ 0.26
HDAC4-205ENST00000454542 ATP2A1O14983 1001 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 RAD21O60216 631 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 ECM2O94769 699 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-205ENST00000454542 SEC23AQ15436 765 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 MORN1Q5T089 497 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-205ENST00000454542 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-205ENST00000454542 ZSCAN10Q96SZ4 725 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-205ENST00000454542 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
HDAC4-205ENST00000454542 SLC27A2O14975 620 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 PDHBP11177 359 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 SLC1A4P43007 532 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 STAT2P52630 851 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 GRB14Q14449 540 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 CREB3L3Q68CJ9 461 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 BTNL9Q6UXG8 535 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC4-205ENST00000454542 PLEKHH3Q7Z736 793 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 RIOX2Q8IUF8 465 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
HDAC4-205ENST00000454542 SLAIN1Q8ND83 568 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 SLC38A10Q9HBR0 1119 aa16.67■□□□□ 0.26
HDAC4-205ENST00000454542 MCCP23508 829 aa16.66■□□□□ 0.26
HDAC4-205ENST00000454542 SLC9C1Q4G0N8 1177 aa16.66■□□□□ 0.26
HDAC4-205ENST00000454542 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
HDAC4-205ENST00000454542 RAET1EQ8TD07 263 aa16.66■□□□□ 0.26
HDAC4-205ENST00000454542 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 SLC25A27O95847 323 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 FDX1P10109 184 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
HDAC4-205ENST00000454542 ERCC3P19447 782 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 PTPREP23469 700 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 GRK4P32298 578 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 COPB2P35606 906 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 OAZ1P54368 228 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 ANTXR2P58335 489 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 TRDNQ13061 729 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 SH3TC2Q8TF17 1288 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms