RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 Q3C1V9 767 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 FAM227BQ96M60 508 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 NAPBQ9H115 298 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 RAD21O60216 631 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 ELNP15502 786 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 ERVK-24P63145 666 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 CTDSPL2Q05D32 466 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 MTFR1Q15390 333 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 CENPFP49454 3210 aa11.28□□□□□ -0.6
CDC42EP3-203ENST00000453555 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.6
CDC42EP3-203ENST00000453555 A0A0G2JMZ2 1700 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 FOXP2O15409 715 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 CNMDO75829 334 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 PPARAQ07869 468 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 ZNF444Q8N0Y2 327 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 PORCNQ9H237 461 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 KANSL2Q9H9L4 492 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
CDC42EP3-203ENST00000453555 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 CCL5P13501 91 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 PDE4AP27815 886 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 UBXN2AP68543 259 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 PDE4BQ07343 736 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 IRF5Q13568 498 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 COG2Q14746 738 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 ZNF287Q9HBT7 754 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 CWC22Q9HCG8 908 aaKnown RBP11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 GJD2Q9UKL4 321 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 RABGAP1Q9Y3P9 1069 aa11.26□□□□□ -0.61
CDC42EP3-203ENST00000453555 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 FLOT1O75955 427 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 INHAP05111 366 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 SLC3A2P08195 630 aaKnown RBP11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 TSPY3P0CV98 308 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 TSPY8P0CW00 308 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 SDSP20132 328 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 CYP2B6P20813 491 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 MAPK4P31152 587 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 GPR142Q7Z601 462 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 LPAR1Q92633 364 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 RNF208Q9H0X6 261 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
CDC42EP3-203ENST00000453555 LAMA4Q16363 1823 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 TFAP4Q01664 338 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 PLS1Q14651 629 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 PLEKHH3Q7Z736 793 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 CEP95Q96GE4 821 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 ZSWIM6Q9HCJ5 1215 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 TACC3Q9Y6A5 838 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
CDC42EP3-203ENST00000453555 F5H6K3 240 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 FGAP02671 866 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 CCNA1P78396 465 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 KLRC3Q07444 240 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 TRIM32Q13049 653 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 ALX1Q15699 326 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
CDC42EP3-203ENST00000453555 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms