RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 DIAPH3Q9NSV4 1193 aa35.66■■■■□ 3.3
CCDC117-206ENST00000453543 GSPT1P15170 499 aaKnown RBP35.65■■■■□ 3.3
CCDC117-206ENST00000453543 TRIM32Q13049 653 aa35.65■■■■□ 3.3
CCDC117-206ENST00000453543 LRRC47Q8N1G4 583 aaKnown RBP35.65■■■■□ 3.3
CCDC117-206ENST00000453543 MB21D1Q8N884 522 aa35.65■■■■□ 3.3
CCDC117-206ENST00000453543 COL11A1P12107 1806 aaPredicted RBP35.64■■■■□ 3.3
CCDC117-206ENST00000453543 ZMYM6O95789 1325 aa35.64■■■■□ 3.3
CCDC117-206ENST00000453543 TTLL1O95922 423 aa35.64■■■■□ 3.3
CCDC117-206ENST00000453543 XRCC5P13010 732 aaKnown RBP35.64■■■■□ 3.3
CCDC117-206ENST00000453543 TTC22Q5TAA0 569 aa35.64■■■■□ 3.3
CCDC117-206ENST00000453543 MKL1Q969V6 931 aa35.64■■■■□ 3.3
CCDC117-206ENST00000453543 PTPREP23469 700 aa35.63■■■■□ 3.29
CCDC117-206ENST00000453543 GJA8P48165 433 aa35.63■■■■□ 3.29
CCDC117-206ENST00000453543 RGS2P41220 211 aa35.62■■■■□ 3.29
CCDC117-206ENST00000453543 MFAP1P55081 439 aaKnown RBP35.62■■■■□ 3.29
CCDC117-206ENST00000453543 PPP1R9AQ9ULJ8 1098 aa35.62■■■■□ 3.29
CCDC117-206ENST00000453543 ADAMTS5Q9UNA0 930 aa35.62■■■■□ 3.29
CCDC117-206ENST00000453543 TSPY2A6NKD2 308 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 HIP1O00291 1037 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 HAND2P61296 217 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 MAP2K5Q13163 448 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 PLS1Q14651 629 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 TMEM132BQ14DG7 1078 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 CCL14Q16627 93 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 APBA2Q99767 749 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 IVNS1ABPQ9Y6Y0 642 aa35.61■■■■□ 3.29
CCDC117-206ENST00000453543 SLC15A5A6NIM6 579 aa35.6■■■■□ 3.29
CCDC117-206ENST00000453543 ORC4O43929 436 aa35.6■■■■□ 3.29
CCDC117-206ENST00000453543 FGRP09769 529 aa35.6■■■■□ 3.29
CCDC117-206ENST00000453543 NKX2-3Q8TAU0 364 aa35.6■■■■□ 3.29
CCDC117-206ENST00000453543 U2AF1L4Q8WU68 220 aaKnown RBP35.6■■■■□ 3.29
CCDC117-206ENST00000453543 PAK6Q9NQU5 681 aaPredicted RBP35.6■■■■□ 3.29
CCDC117-206ENST00000453543 RANBP6O60518 1105 aaKnown RBP35.59■■■■□ 3.29
CCDC117-206ENST00000453543 NMT2O60551 498 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 ZKSCAN1P17029 563 aaPredicted RBP35.59■■■■□ 3.29
CCDC117-206ENST00000453543 ERCC3P19447 782 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 GRB14Q14449 540 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 SHCBP1Q8NEM2 672 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 IL17RBQ9NRM6 502 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 SYNPO2Q9UMS6 1093 aa35.59■■■■□ 3.29
CCDC117-206ENST00000453543 VWA5AO00534 786 aa35.58■■■■□ 3.29
CCDC117-206ENST00000453543 GMCL1P1Q8NEA9 526 aa35.58■■■■□ 3.29
CCDC117-206ENST00000453543 DEFB118Q96PH6 123 aa35.58■■■■□ 3.29
CCDC117-206ENST00000453543 NBPF3Q9H094 633 aa35.58■■■■□ 3.29
CCDC117-206ENST00000453543 XRN2Q9H0D6 950 aaKnown RBP eCLIP35.58■■■■□ 3.29
CCDC117-206ENST00000453543 SLF1Q9BQI6 1058 aa35.57■■■■□ 3.28
CCDC117-206ENST00000453543 TOMM22Q9NS69 142 aa35.57■■■■□ 3.28
CCDC117-206ENST00000453543 ZNF236Q9UL36 1845 aa35.57■■■■□ 3.28
CCDC117-206ENST00000453543 SGPL1O95470 568 aa35.56■■■■□ 3.28
CCDC117-206ENST00000453543 RRP12Q5JTH9 1297 aaKnown RBP35.56■■■■□ 3.28
CCDC117-206ENST00000453543 MAP3K21Q5TCX8 1036 aa35.56■■■■□ 3.28
CCDC117-206ENST00000453543 NCAPG2Q86XI2 1143 aa35.56■■■■□ 3.28
CCDC117-206ENST00000453543 TRMT44Q8IYL2 757 aaKnown RBP35.56■■■■□ 3.28
CCDC117-206ENST00000453543 REPS2Q8NFH8 660 aa35.56■■■■□ 3.28
CCDC117-206ENST00000453543 LAMA4Q16363 1823 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 PRKAR2AP13861 404 aaKnown RBP35.55■■■■□ 3.28
CCDC117-206ENST00000453543 SLFN13Q68D06 897 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 TBC1D10CQ8IV04 446 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 IL25Q9H293 177 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 STX8Q9UNK0 236 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 RPTORQ8N122 1335 aa35.55■■■■□ 3.28
CCDC117-206ENST00000453543 NPLOC4Q8TAT6 608 aa35.54■■■■□ 3.28
CCDC117-206ENST00000453543 MROH8Q9H579 483 aa35.54■■■■□ 3.28
CCDC117-206ENST00000453543 HMX1Q9NP08 348 aaPredicted RBP35.54■■■■□ 3.28
CCDC117-206ENST00000453543 FLRT1Q9NZU1 646 aa35.54■■■■□ 3.28
CCDC117-206ENST00000453543 ZNF214Q9UL59 606 aaPredicted RBP35.54■■■■□ 3.28
CCDC117-206ENST00000453543 HOXC6P09630 235 aa35.53■■■■□ 3.28
CCDC117-206ENST00000453543 ADORA2AP29274 412 aa35.53■■■■□ 3.28
CCDC117-206ENST00000453543 CACNB2Q08289 660 aaPredicted RBP35.52■■■■□ 3.28
CCDC117-206ENST00000453543 PPP4R3BQ5MIZ7 849 aa35.52■■■■□ 3.28
CCDC117-206ENST00000453543 AKNAD1Q5T1N1 836 aa35.52■■■■□ 3.28
CCDC117-206ENST00000453543 CHMP4CQ96CF2 233 aa35.52■■■■□ 3.28
CCDC117-206ENST00000453543 STRNO43815 780 aa35.51■■■■□ 3.28
CCDC117-206ENST00000453543 UBE2Q1Q7Z7E8 422 aa35.51■■■■□ 3.28
CCDC117-206ENST00000453543 RIOX2Q8IUF8 465 aa35.51■■■■□ 3.28
CCDC117-206ENST00000453543 PRPF38AQ8NAV1 312 aaKnown RBP35.51■■■■□ 3.28
CCDC117-206ENST00000453543 STAG1Q8WVM7 1258 aa35.51■■■■□ 3.28
CCDC117-206ENST00000453543 DSCC1Q9BVC3 393 aa35.51■■■■□ 3.28
CCDC117-206ENST00000453543 SLC25A27O95847 323 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 TFRCP02786 760 aaKnown RBP35.5■■■■□ 3.27
CCDC117-206ENST00000453543 BMP3P12645 472 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 STAT3P40763 770 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 NOVP48745 357 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 MFSD6Q6ZSS7 791 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 KIFC2Q96AC6 838 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 CRISPLD2Q9H0B8 497 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 FEM1BQ9UK73 627 aa35.5■■■■□ 3.27
CCDC117-206ENST00000453543 RASGRP2Q7LDG7 609 aa35.49■■■■□ 3.27
CCDC117-206ENST00000453543 DPP9Q86TI2 863 aa35.49■■■■□ 3.27
CCDC117-206ENST00000453543 GMCL1Q96IK5 515 aa35.49■■■■□ 3.27
CCDC117-206ENST00000453543 ISY1Q9ULR0 285 aaKnown RBP35.49■■■■□ 3.27
CCDC117-206ENST00000453543 NEDD4P46934 1319 aa35.49■■■■□ 3.27
CCDC117-206ENST00000453543 ZNF213O14771 459 aa35.48■■■■□ 3.27
CCDC117-206ENST00000453543 COBLO75128 1261 aa35.48■■■■□ 3.27
CCDC117-206ENST00000453543 FARP2O94887 1054 aaPredicted RBP35.47■■■■□ 3.27
CCDC117-206ENST00000453543 PCP11498 1178 aaKnown RBP35.47■■■■□ 3.27
CCDC117-206ENST00000453543 MCCP23508 829 aa35.47■■■■□ 3.27
CCDC117-206ENST00000453543 ABRAQ8N0Z2 381 aa35.47■■■■□ 3.27
CCDC117-206ENST00000453543 FCER1AP12319 257 aa35.46■■■■□ 3.27
CCDC117-206ENST00000453543 CCND3P30281 292 aaPredicted RBP35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms