RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 TCP11L1Q9NUJ3 509 aa18.46■□□□□ 0.55
VCX3B-204ENST00000453306 PHIPQ8WWQ0 1821 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
VCX3B-204ENST00000453306 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 ELNP15502 786 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 HMGCS2P54868 508 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 SEC23AQ15436 765 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 NCOA7Q8NI08 942 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 NEK1Q96PY6 1258 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
VCX3B-204ENST00000453306 RBM25P49756 843 aaKnown RBP18.44■□□□□ 0.54
VCX3B-204ENST00000453306 SH3D19Q5HYK7 790 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 IGDCC4Q8TDY8 1250 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 JAKMIP1Q96N16 626 aaKnown RBP18.44■□□□□ 0.54
VCX3B-204ENST00000453306 LRRC2Q9BYS8 371 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 CNNM2Q9H8M5 875 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 KANSL2Q9H9L4 492 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 TMOD4Q9NZQ9 345 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 PTPRFP10586 1907 aa18.44■□□□□ 0.54
VCX3B-204ENST00000453306 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ICA1Q05084 483 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ANKS1AQ92625 1134 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 MKL1Q969V6 931 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ASCC2Q9H1I8 757 aaPredicted RBP18.43■□□□□ 0.54
VCX3B-204ENST00000453306 ZSWIM6Q9HCJ5 1215 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 NYAP2Q9P242 653 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 LAMA4Q16363 1823 aa18.43■□□□□ 0.54
VCX3B-204ENST00000453306 PRC1O43663 620 aa18.42■□□□□ 0.54
VCX3B-204ENST00000453306 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
VCX3B-204ENST00000453306 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
VCX3B-204ENST00000453306 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
VCX3B-204ENST00000453306 DEFB118Q96PH6 123 aa18.42■□□□□ 0.54
VCX3B-204ENST00000453306 UPF3BQ9BZI7 483 aaKnown RBP18.42■□□□□ 0.54
VCX3B-204ENST00000453306 PAK6Q9NQU5 681 aaPredicted RBP18.42■□□□□ 0.54
VCX3B-204ENST00000453306 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
VCX3B-204ENST00000453306 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 BACE1P56817 501 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 ANAPC15P60006 121 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 TRDNQ13061 729 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 MTMR2Q13614 643 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 KRT32Q14532 448 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
VCX3B-204ENST00000453306 RALYLQ86SE5 291 aaKnown RBP18.41■□□□□ 0.54
VCX3B-204ENST00000453306 LRRC47Q8N1G4 583 aaKnown RBP18.41■□□□□ 0.54
VCX3B-204ENST00000453306 TMEM47Q9BQJ4 181 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 TM6SF1Q9BZW5 370 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
VCX3B-204ENST00000453306 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
VCX3B-204ENST00000453306 LOC285556D6RIA3 1793 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 EVI5O60447 810 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 HMGCRP04035 888 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
VCX3B-204ENST00000453306 RPS6KB1P23443 525 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 MCCP23508 829 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
VCX3B-204ENST00000453306 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
VCX3B-204ENST00000453306 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
VCX3B-204ENST00000453306 MORF4L1Q9UBU8 362 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 TNKSO95271 1327 aa18.4■□□□□ 0.54
VCX3B-204ENST00000453306 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 USP17L10C9JJH3 530 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 SH2B2O14492 632 aaPredicted RBP18.39■□□□□ 0.53
VCX3B-204ENST00000453306 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
VCX3B-204ENST00000453306 TTLL1O95922 423 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 MCM5P33992 734 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 ANKLE1Q8NAG6 615 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
VCX3B-204ENST00000453306 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 TTC14Q96N46 770 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 CRISPLD2Q9H0B8 497 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.39■□□□□ 0.53
VCX3B-204ENST00000453306 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 STX8Q9UNK0 236 aa18.39■□□□□ 0.53
VCX3B-204ENST00000453306 ATAD5Q96QE3 1844 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
VCX3B-204ENST00000453306 NT5C2P49902 561 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 NECAB2Q7Z6G3 386 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
VCX3B-204ENST00000453306 HMX1Q9NP08 348 aaPredicted RBP18.38■□□□□ 0.53
VCX3B-204ENST00000453306 F5H6K3 240 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 NDUFB10O96000 172 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
VCX3B-204ENST00000453306 KLRC3Q07444 240 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 TMEM67Q5HYA8 995 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 CCAR1Q8IX12 1150 aaKnown RBP18.37■□□□□ 0.53
VCX3B-204ENST00000453306 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
VCX3B-204ENST00000453306 SPICE1Q8N0Z3 855 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms