RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
DEPDC1B-202ENST00000453022 ATP8A2Q9NTI2 1148 aa10.66□□□□□ -0.7
DEPDC1B-202ENST00000453022 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
DEPDC1B-202ENST00000453022 SEPT4O43236 478 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 ATP5JP18859 108 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 CDK8P49336 464 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 SNX17Q15036 470 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 NCAPG2Q86XI2 1143 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 ABRAQ8N0Z2 381 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 MAML3Q96JK9 1138 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 HAUS7Q99871 368 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 FBXO28Q9NVF7 368 aa10.65□□□□□ -0.7
DEPDC1B-202ENST00000453022 USP17L12C9JPN9 530 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 KBTBD13C9JR72 458 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 USP17L21D6R901 530 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 POTEB2H3BUK9 544 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 RAB11FIP3O75154 756 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 HMMRO75330 724 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 EEF2P13639 858 aaKnown RBP10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 SLC39A5Q6ZMH5 540 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 CCDC17Q96LX7 622 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 GUCD1Q96NT3 240 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 SH2D4AQ9H788 454 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 DDX19BQ9UMR2 479 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 ADAMTS5Q9UNA0 930 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 ATP11BQ9Y2G3 1177 aa10.65□□□□□ -0.71
DEPDC1B-202ENST00000453022 MS4A1P11836 297 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 LRRC41Q15345 812 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 UBE3CQ15386 1083 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 TRIM60Q495X7 471 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 PUS7LQ9H0K6 701 aaKnown RBP10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 ROBO3Q96MS0 1386 aa10.64□□□□□ -0.71
DEPDC1B-202ENST00000453022 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 PGK2P07205 417 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 FCER1AP12319 257 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 FAM109BQ6ICB4 259 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 SLC5A4Q9NY91 659 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 ZNF214Q9UL59 606 aaPredicted RBP10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 LRRC37A2A6NM11 1700 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 REV3LO60673 3130 aa10.63□□□□□ -0.71
DEPDC1B-202ENST00000453022 VWA5AO00534 786 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 SMARCA5O60264 1052 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 SLC25A27O95847 323 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 SHHQ15465 462 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 ZNF792Q3KQV3 632 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 C9orf50Q5SZB4 431 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 RIOX2Q8IUF8 465 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 FERMT2Q96AC1 680 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 FAM161BQ96MY7 647 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 MMP19Q99542 508 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 KANSL2Q9H9L4 492 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 PRDM5Q9NQX1 630 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
DEPDC1B-202ENST00000453022 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 C1orf53Q5VUE5 145 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 AMOTL1Q8IY63 956 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 BADQ92934 168 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 LENG1Q96BZ8 264 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 GOPCQ9HD26 462 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 ARPP21Q9UBL0 812 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 PHF24Q9UPV7 400 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 LCTP09848 1927 aa10.61□□□□□ -0.71
DEPDC1B-202ENST00000453022 PGK1P00558 417 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 ZNF865P0CJ78 1059 aaPredicted RBP10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 RASA1P20936 1047 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 ITGB8P26012 769 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 STRBPQ96SI9 672 aaKnown RBP10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 TINF2Q9BSI4 451 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 LRRCC1Q9C099 1032 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 XPNPEP3Q9NQH7 507 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 MUC3AQ02505 3323 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 CHD7Q9P2D1 2997 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 GSG1L2A8MUP6 293 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 RARBP10826 455 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 STAT3P40763 770 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 TLE2Q04725 743 aa10.6□□□□□ -0.71
DEPDC1B-202ENST00000453022 KCTD2Q14681 263 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms