RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 USP17L20D6RJB6 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 SNHG28P0DPA3 235 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 SLC1A4P43007 532 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L24Q0WX57 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 SGMS1Q86VZ5 419 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 MYL10Q9BUA6 226 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 A0A0G2JMZ2 1700 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 BMP3P12645 472 aa28.16■■■□□ 2.1
CPSF4-207ENST00000451876 MAP2K1Q02750 393 aaPredicted RBP28.16■■■□□ 2.1
CPSF4-207ENST00000451876 PABPC4Q13310 644 aaKnown RBP eCLIP28.16■■■□□ 2.1
CPSF4-207ENST00000451876 TAF1CQ15572 869 aaPredicted RBP28.16■■■□□ 2.1
CPSF4-207ENST00000451876 NFXL1Q6ZNB6 911 aa28.16■■■□□ 2.1
CPSF4-207ENST00000451876 KCTD1Q719H9 257 aa28.16■■■□□ 2.1
CPSF4-207ENST00000451876 BRF1Q92994 677 aa28.16■■■□□ 2.1
CPSF4-207ENST00000451876 FBXO28Q9NVF7 368 aa28.16■■■□□ 2.1
CPSF4-207ENST00000451876 FRMPD2Q68DX3 1309 aaPredicted RBP28.15■■■□□ 2.1
CPSF4-207ENST00000451876 FGD1P98174 961 aa28.15■■■□□ 2.1
CPSF4-207ENST00000451876 TROAPQ12815 778 aa28.15■■■□□ 2.1
CPSF4-207ENST00000451876 ZNF654Q8IZM8 581 aa28.15■■■□□ 2.1
CPSF4-207ENST00000451876 DCAF4Q8WV16 495 aa28.15■■■□□ 2.1
CPSF4-207ENST00000451876 BRPF3Q9ULD4 1205 aa28.15■■■□□ 2.1
CPSF4-207ENST00000451876 CCDC69A6NI79 296 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 TRPA1O75762 1119 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 ALDH1A1P00352 501 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 IRX3P78415 501 aaPredicted RBP28.14■■■□□ 2.1
CPSF4-207ENST00000451876 CRHR2Q13324 411 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 TOB2Q14106 344 aaPredicted RBP28.14■■■□□ 2.1
CPSF4-207ENST00000451876 CCDC96Q2M329 555 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 TMTC2Q8N394 836 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 FBXL16Q8N461 479 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 PDRG1Q9NUG6 133 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 WBP1LQ9NX94 342 aa28.14■■■□□ 2.1
CPSF4-207ENST00000451876 ISY1Q9ULR0 285 aaKnown RBP28.14■■■□□ 2.1
CPSF4-207ENST00000451876 GOLGA8HP0CJ92 632 aa28.14■■■□□ 2.09
CPSF4-207ENST00000451876 RAB11FIP4Q86YS3 637 aa28.14■■■□□ 2.09
CPSF4-207ENST00000451876 PARK7Q99497 189 aaKnown RBP28.14■■■□□ 2.09
CPSF4-207ENST00000451876 P2RX7Q99572 595 aaKnown RBP28.14■■■□□ 2.09
CPSF4-207ENST00000451876 R3HDMLQ9H3Y0 253 aa28.14■■■□□ 2.09
CPSF4-207ENST00000451876 PNMA3Q9UL41 463 aa28.14■■■□□ 2.09
CPSF4-207ENST00000451876 FLOT1O75955 427 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 RXRAP19793 462 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 OSBPP22059 807 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 ZNF543Q08ER8 600 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 APOBRQ0VD83 1088 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 CATIPQ7Z7H3 387 aa28.13■■■□□ 2.09
CPSF4-207ENST00000451876 ADGRA2Q96PE1 1338 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 TMEM232C9JQI7 657 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 CA12O43570 354 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 NEK4P51957 841 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 APOA5Q6Q788 366 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 POTEEQ6S8J3 1075 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 SLC12A7Q9Y666 1083 aa28.12■■■□□ 2.09
CPSF4-207ENST00000451876 KLF18A0A0U1RQI7 1052 aa28.11■■■□□ 2.09
CPSF4-207ENST00000451876 SPDYE16A6NNV3 312 aaPredicted RBP28.11■■■□□ 2.09
CPSF4-207ENST00000451876 HERVK_113P62684 666 aa28.11■■■□□ 2.09
CPSF4-207ENST00000451876 TTBK2Q6IQ55 1244 aa28.11■■■□□ 2.09
CPSF4-207ENST00000451876 SAMD1Q6SPF0 538 aaPredicted RBP28.11■■■□□ 2.09
CPSF4-207ENST00000451876 SMCR8Q8TEV9 937 aaPredicted RBP28.11■■■□□ 2.09
CPSF4-207ENST00000451876 NUP133Q8WUM0 1156 aa28.11■■■□□ 2.09
CPSF4-207ENST00000451876 LARP6Q9BRS8 491 aaKnown RBP28.11■■■□□ 2.09
CPSF4-207ENST00000451876 GPCPD1Q9NPB8 672 aa28.11■■■□□ 2.09
CPSF4-207ENST00000451876 DDAH1O94760 285 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 TBC1D8O95759 1140 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 MICU3Q86XE3 530 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 STAG2Q8N3U4 1231 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 STAT2P52630 851 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 COG2Q14746 738 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 CPVLQ9H3G5 476 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 ZFYVE28Q9HCC9 887 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 SAGE1Q9NXZ1 904 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 MAD2L2Q9UI95 211 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 TSKSQ9UJT2 592 aa28.1■■■□□ 2.09
CPSF4-207ENST00000451876 TLR2O60603 784 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 PEX10O60683 326 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 PARP1P09874 1014 aaKnown RBP28.09■■■□□ 2.09
CPSF4-207ENST00000451876 SLC16A2P36021 539 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 AK2P54819 239 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 GRM4Q14833 912 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 CCDC144CPQ8IYA2 1237 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 ATG4CQ96DT6 458 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 SLF1Q9BQI6 1058 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 BEGAINQ9BUH8 593 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 CFHR5Q9BXR6 569 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 FEM1BQ9UK73 627 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 PPP1R9AQ9ULJ8 1098 aa28.09■■■□□ 2.09
CPSF4-207ENST00000451876 DSG3P32926 999 aa28.08■■■□□ 2.09
CPSF4-207ENST00000451876 ASPRV1Q53RT3 343 aa28.08■■■□□ 2.09
CPSF4-207ENST00000451876 GPATCH4Q5T3I0 446 aaKnown RBP28.08■■■□□ 2.09
CPSF4-207ENST00000451876 IKQ13123 557 aaPredicted RBP28.07■■■□□ 2.08
CPSF4-207ENST00000451876 KIFC2Q96AC6 838 aa28.07■■■□□ 2.08
CPSF4-207ENST00000451876 ALDH8A1Q9H2A2 487 aaPredicted RBP28.07■■■□□ 2.08
CPSF4-207ENST00000451876 CPA4Q9UI42 421 aa28.07■■■□□ 2.08
CPSF4-207ENST00000451876 NAP1L2Q9ULW6 460 aaPredicted RBP28.07■■■□□ 2.08
CPSF4-207ENST00000451876 MYPNQ86TC9 1320 aa28.07■■■□□ 2.08
CPSF4-207ENST00000451876 PALM3A6NDB9 673 aaPredicted RBP28.07■■■□□ 2.08
CPSF4-207ENST00000451876 EVCP57679 992 aa28.07■■■□□ 2.08
CPSF4-207ENST00000451876 TXNRD2Q9NNW7 524 aa28.07■■■□□ 2.08
CPSF4-207ENST00000451876 GOLGA8BA8MQT2 603 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 ZBTB43O43298 467 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms