RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PRKAR2AP13861 404 aaKnown RBP20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 PPARAQ07869 468 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 VPS53Q5VIR6 699 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 DPF3Q92784 378 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 FAM227BQ96M60 508 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 SPATC1LQ9H0A9 340 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 DIAPH3Q9NSV4 1193 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 NYAP2Q9P242 653 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
PRPF40A-204ENST00000450303 CTDSPL2Q05D32 466 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 UBE2Q1Q7Z7E8 422 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 APBA2Q99767 749 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 CRISPLD2Q9H0B8 497 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
PRPF40A-204ENST00000450303 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 ERCC3P19447 782 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 PDE4BQ07343 736 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 MAP3K21Q5TCX8 1036 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 NCAPG2Q86XI2 1143 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 NPLOC4Q8TAT6 608 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 CEP95Q96GE4 821 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
PRPF40A-204ENST00000450303 F5H6K3 240 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 CCND3P30281 292 aaPredicted RBP20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 TFAP4Q01664 338 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 KLRC3Q07444 240 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 GRB14Q14449 540 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 TMEM132BQ14DG7 1078 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
PRPF40A-204ENST00000450303 ZNFX1Q9P2E3 1918 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 NDUFB10O96000 172 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 MCMDC2Q4G0Z9 681 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 NEDD1Q8NHV4 660 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 DIS3LQ8TF46 1054 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 CHMP4CQ96CF2 233 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 PAWRQ96IZ0 340 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 TACC3Q9Y6A5 838 aa20.18■□□□□ 0.82
PRPF40A-204ENST00000450303 CHMLP26374 656 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 ADORA2AP29274 412 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 DPP9Q86TI2 863 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 SHCBP1Q8NEM2 672 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 HTATIP2Q9BUP3 242 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 ADAMTS5Q9UNA0 930 aa20.17■□□□□ 0.82
PRPF40A-204ENST00000450303 H0YGN5 161 aa20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 VWA5AO00534 786 aa20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 MFSD14CQ5VZR4 134 aa20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 ZNF589Q86UQ0 364 aaPredicted RBP20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 MKL1Q969V6 931 aa20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 MROH8Q9H579 483 aa20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRPF40A-204ENST00000450303 STRNO43815 780 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 COBLO75128 1261 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 TTLL1O95922 423 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 HOXC6P09630 235 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 CYP2C19P33261 490 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
PRPF40A-204ENST00000450303 RAD50Q92878 1312 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 TSPY2A6NKD2 308 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 FGAP02671 866 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 HSPD1P10809 573 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 STAT3P40763 770 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 SLC4A3P48751 1232 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 ALX1Q15699 326 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 REPS2Q8NFH8 660 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 OGDHLQ9ULD0 1010 aa20.14■□□□□ 0.81
PRPF40A-204ENST00000450303 PLIN4Q96Q06 1357 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 NMT2O60551 498 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 SLC25A27O95847 323 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 CAPN2P17655 700 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 CNGA1P29973 690 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 LHX8Q68G74 356 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 NECAB2Q7Z6G3 386 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 RIOX2Q8IUF8 465 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 KIFC2Q96AC6 838 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 TOMM22Q9NS69 142 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 ANAPC4Q9UJX5 808 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 ZNF214Q9UL59 606 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms