RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 E7EVH7 732 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 OPLAHO14841 1288 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 PDE6BP35913 854 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 XRCC4Q13426 336 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 RESP18Q5W5W9 173 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 DRAXINQ8NBI3 349 aaPredicted RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 C3orf20Q8ND61 904 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 RUBCNQ92622 972 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 CYFIP2Q96F07 1278 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 ZNF274Q96GC6 653 aaPredicted RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 OSBPL7Q9BZF2 842 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 EBF2Q9HAK2 575 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 POLD4Q9HCU8 107 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 TRIM10Q9UDY6 481 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.64□□□□□ -0.87
LSM5-208ENST00000450169 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
LSM5-208ENST00000450169 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 TMEM2Q9UHN6 1383 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 SRRM3A6NNA2 597 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 POM121CA8CG34 1229 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 KIF28PB7ZC32 967 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 TBC1D12O60347 775 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 PPP6R2O75170 966 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 SMNDC1O75940 238 aaKnown RBP eCLIP9.63□□□□□ -0.87
LSM5-208ENST00000450169 ATP6V1G2O95670 118 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 KRT14P02533 472 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 NR1D1P20393 614 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 RFC5P40937 340 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 EPHB4P54760 987 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 C2orf54Q08AI8 447 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 TBC1D25Q3MII6 688 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 THEMIS2Q5TEJ8 643 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 EMC10Q5UCC4 262 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 EMBQ6PCB8 327 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 APTXQ7Z2E3 356 aaKnown RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 EAF2Q96CJ1 260 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 STAMBPL1Q96FJ0 436 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 MED15Q96RN5 788 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 NOD2Q9HC29 1040 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 ABHD10Q9NUJ1 306 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 KCNH3Q9ULD8 1083 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 FOXN1O15353 648 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 CLSTN1O94985 981 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 MDH1P40925 334 aaKnown RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 SCTRP47872 440 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 SLMAPQ14BN4 828 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 ZNF827Q17R98 1081 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 CCDC181Q5TID7 509 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 TAX1BP1Q86VP1 789 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 RPUSD2Q8IZ73 545 aaKnown RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 CUL5Q93034 780 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 ZIM3Q96PE6 472 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 HAUS4Q9H6D7 363 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 ADD3Q9UEY8 706 aaKnown RBP9.63□□□□□ -0.87
LSM5-208ENST00000450169 C15orf41Q9Y2V0 281 aa9.63□□□□□ -0.87
LSM5-208ENST00000450169 ERICH2A1L162 156 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 PDE2AO00408 941 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 FESP07332 822 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 KIF23Q02241 960 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 APBA1Q02410 837 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 POSTNQ15063 836 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 ACSBG1Q96GR2 724 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 CTAGE1Q96RT6 745 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 TMX4Q9H1E5 349 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 BAIAP2L1Q9UHR4 511 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 CORO1CQ9ULV4 474 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 ITIH6Q6UXX5 1313 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 MAP3K7O43318 606 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 AHCYL1O43865 530 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 RTN3O95197 1032 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 ERCC5P28715 1186 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 CLK2P49760 499 aaKnown RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 PLCD1P51178 756 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 MORC3Q14149 939 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 BEND3Q5T5X7 828 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 NT5DC1Q5TFE4 455 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 CRELD2Q6UXH1 353 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms