RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 ALDH1A1P00352 501 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 Q6ZUG5 572 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 KIF2CQ99661 725 aa16.44■□□□□ 0.22
CTSS-202ENST00000448301 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
CTSS-202ENST00000448301 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
CTSS-202ENST00000448301 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 PDHXO00330 501 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 PDHBP11177 359 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 COL11A1P12107 1806 aaPredicted RBP16.43■□□□□ 0.22
CTSS-202ENST00000448301 BMP3P12645 472 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
CTSS-202ENST00000448301 DDAH1O94760 285 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 OSBPP22059 807 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 SLC1A4P43007 532 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 FGD1P98174 961 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
CTSS-202ENST00000448301 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 CATIPQ7Z7H3 387 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
CTSS-202ENST00000448301 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
CTSS-202ENST00000448301 PCNTO95613 3336 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 TROAPQ12815 778 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 BRF1Q92994 677 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 PARK7Q99497 189 aaKnown RBP16.41■□□□□ 0.22
CTSS-202ENST00000448301 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
CTSS-202ENST00000448301 CFHR5Q9BXR6 569 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
CTSS-202ENST00000448301 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
CTSS-202ENST00000448301 PLA2G6O60733 806 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 IRX3P78415 501 aaPredicted RBP16.4■□□□□ 0.22
CTSS-202ENST00000448301 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 TOB2Q14106 344 aaPredicted RBP16.4■□□□□ 0.22
CTSS-202ENST00000448301 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
CTSS-202ENST00000448301 CCDC96Q2M329 555 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 ASPRV1Q53RT3 343 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
CTSS-202ENST00000448301 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 SAGE1Q9NXZ1 904 aa16.4■□□□□ 0.22
CTSS-202ENST00000448301 CA12O43570 354 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 FLOT1O75955 427 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 CALM1P0DP23 149 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 CALM2P0DP24 149 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 CALM3P0DP25 149 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 NEK4P51957 841 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 RCAN1P53805 252 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 EVCP57679 992 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 COG2Q14746 738 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 GRM4Q14833 912 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 RABEP1Q15276 862 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 APOA5Q6Q788 366 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 SYNE3Q6ZMZ3 975 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 KCTD1Q719H9 257 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 FEM1BQ9UK73 627 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 MYH6P13533 1939 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 NID2Q14112 1375 aa16.39■□□□□ 0.21
CTSS-202ENST00000448301 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 PARP1P09874 1014 aaKnown RBP16.38■□□□□ 0.21
CTSS-202ENST00000448301 CYP2C8P10632 490 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 STAT2P52630 851 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 HERVK_113P62684 666 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 GTF3C2Q8WUA4 911 aaPredicted RBP16.38■□□□□ 0.21
CTSS-202ENST00000448301 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
CTSS-202ENST00000448301 FRMPD2Q68DX3 1309 aaPredicted RBP16.38■□□□□ 0.21
CTSS-202ENST00000448301 PALM3A6NDB9 673 aaPredicted RBP16.37■□□□□ 0.21
CTSS-202ENST00000448301 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
CTSS-202ENST00000448301 ZBTB43O43298 467 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 AK2P54819 239 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 CRHR2Q13324 411 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 BTNL9Q6UXG8 535 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
CTSS-202ENST00000448301 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
CTSS-202ENST00000448301 CHURC1Q8WUH1 139 aa16.37■□□□□ 0.21
CTSS-202ENST00000448301 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms