RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 DOCK3Q8IZD9 2030 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 LAMA2P24043 3122 aaKnown RBP16.67■□□□□ 0.26
SREBF1-207ENST00000447641 F5H6K3 240 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
SREBF1-207ENST00000447641 HERVK_113P62684 666 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-207ENST00000447641 ATP2B2Q01814 1243 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 KLRC3Q07444 240 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 RCSD1Q6JBY9 416 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 TTC14Q96N46 770 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 KRT23Q9C075 422 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 TOMM22Q9NS69 142 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 SRRDQ9UH36 339 aa16.67■□□□□ 0.26
SREBF1-207ENST00000447641 B4E1Z4 1266 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 KDM4AO75164 1064 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 NDUFB10O96000 172 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 COG2Q14746 738 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-207ENST00000447641 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 RBPJLQ9UBG7 517 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 MORF4L1Q9UBU8 362 aa16.66■□□□□ 0.26
SREBF1-207ENST00000447641 E7EWF7 191 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 SLC27A2O14975 620 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 GNRH1P01148 92 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 PSMC4P43686 418 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 PRMT2P55345 433 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 KIF22Q14807 665 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-207ENST00000447641 HOXC10Q9NYD6 342 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
SREBF1-207ENST00000447641 EYSQ5T1H1 3165 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-207ENST00000447641 GJA8P48165 433 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
SREBF1-207ENST00000447641 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 KCNB2Q92953 911 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 TMEM47Q9BQJ4 181 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 TXNRD2Q9NNW7 524 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
SREBF1-207ENST00000447641 CNMDO75829 334 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
SREBF1-207ENST00000447641 GRK4P32298 578 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 DSG3P32926 999 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-207ENST00000447641 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
SREBF1-207ENST00000447641 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
SREBF1-207ENST00000447641 CCL5P13501 91 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 PRKCZQ05513 592 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 SEC23AQ15436 765 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 Q3C1V9 767 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-207ENST00000447641 NCOA7Q8NI08 942 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-207ENST00000447641 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 FBXO28Q9NVF7 368 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 GABRQQ9UN88 632 aa16.62■□□□□ 0.25
SREBF1-207ENST00000447641 DNAH12Q6ZR08 3092 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-207ENST00000447641 PEX10O60683 326 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 PLA2G6O60733 806 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 FLOT1O75955 427 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 REC8O95072 547 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 GJB1P08034 283 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 TRDNQ13061 729 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-207ENST00000447641 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 DPF3Q92784 378 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 PPP1R9AQ9ULJ8 1098 aa16.61■□□□□ 0.25
SREBF1-207ENST00000447641 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 BMP3P12645 472 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 MCCP23508 829 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 ANTXR2P58335 489 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 ERVK-24P63145 666 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-207ENST00000447641 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 UNC93B1Q9H1C4 597 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 FEM1BQ9UK73 627 aa16.6■□□□□ 0.25
SREBF1-207ENST00000447641 COL11A1P12107 1806 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms