RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 HOXA10P31260 410 aaPredicted RBP19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 FANCCQ00597 558 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 INF2Q27J81 1249 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 CREBRFQ8IUR6 639 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 LRRC8AQ8IWT6 810 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 CRAMP1Q96RY5 1269 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 PARP3Q9Y6F1 533 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 USP27XA6NNY8 438 aa19.17■□□□□ 0.66
LAPTM4B-201ENST00000445593 TPM3P06753 285 aa19.17■□□□□ 0.66
LAPTM4B-201ENST00000445593 SKILP12757 684 aa19.17■□□□□ 0.66
LAPTM4B-201ENST00000445593 ATP6V0A2Q9Y487 856 aa19.17■□□□□ 0.66
LAPTM4B-201ENST00000445593 FMR1Q06787 632 aaKnown RBP eCLIP19.17■□□□□ 0.663e-10■■■■□ 20.1
LAPTM4B-201ENST00000445593 BLIDQ8IZY5 108 aa19.17■□□□□ 0.66
LAPTM4B-201ENST00000445593 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 MYL5Q02045 173 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 TPD52L1Q16890 204 aaPredicted RBP19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 NLGN1Q8N2Q7 840 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 TMX4Q9H1E5 349 aaPredicted RBP19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 USP40Q9NVE5 1235 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 BRWD3Q6RI45 1802 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 PP2D1A8MPX8 630 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 SP8Q8IXZ3 490 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 TNFRSF25Q93038 417 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 ACTN4O43707 911 aaKnown RBP19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 UIMC1Q96RL1 719 aa19.16■□□□□ 0.66
LAPTM4B-201ENST00000445593 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 UBASH3AP57075 661 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 NFIAQ12857 509 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 GRM4Q14833 912 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 HSD3B7Q9H2F3 369 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 GPCPD1Q9NPB8 672 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 AKR1B1P15121 316 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 NAPAP54920 295 aa19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 MDM2Q00987 491 aaPredicted RBP19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
LAPTM4B-201ENST00000445593 TBC1D22AQ8WUA7 517 aa19.14■□□□□ 0.66
LAPTM4B-201ENST00000445593 MAPK8IP1Q9UQF2 711 aa19.14■□□□□ 0.66
LAPTM4B-201ENST00000445593 PARP1P09874 1014 aaKnown RBP19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 IL17AQ16552 155 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 C15orf52Q6ZUT6 534 aaKnown RBP19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 PIGSQ96S52 555 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 NFE2L3Q9Y4A8 694 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 KIAA1551Q9HCM1 1747 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 ZFPM1Q8IX07 1006 aa19.14■□□□□ 0.65
LAPTM4B-201ENST00000445593 FAM237AA0A1B0GTK4 181 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 PLCG2P16885 1265 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 ZSCAN29Q8IWY8 852 aaPredicted RBP19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 SPTLC3Q9NUV7 552 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 NPR1P16066 1061 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 KARSQ15046 597 aaKnown RBP19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 SAMSN1Q9NSI8 373 aaKnown RBP19.13■□□□□ 0.65
LAPTM4B-201ENST00000445593 JAKMIP3Q5VZ66 844 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 SLF2Q8IX21 1173 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 COA1Q9GZY4 146 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 PCDHA4Q9UN74 947 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 CDC25BP30305 580 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 LETM2Q2VYF4 491 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 TMEM60Q9H2L4 133 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 SNED1Q8TER0 1413 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 RGS22Q8NE09 1264 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 PAGE5Q96GU1 130 aa19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 BIN2Q9UBW5 565 aaPredicted RBP19.12■□□□□ 0.65
LAPTM4B-201ENST00000445593 ZBTB22O15209 634 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 TPM2P07951 284 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 SLC16A2P36021 539 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 ATP2C1P98194 919 aaPredicted RBP19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 COA7Q96BR5 231 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 NEDD1Q8NHV4 660 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 AKT1S1Q96B36 256 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 PCDHA6Q9UN73 950 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 PCDHA8Q9Y5H6 950 aa19.11■□□□□ 0.65
LAPTM4B-201ENST00000445593 LAMB1P07942 1786 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 TNNT1P13805 278 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 CALML3P27482 149 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 ARMCX5Q6P1M9 558 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 BPIFA3Q9BQP9 254 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 PDGFDQ9GZP0 370 aaPredicted RBP19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 TMEM260Q9NX78 707 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 STXBP3O00186 592 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 GAKO14976 1311 aa19.1■□□□□ 0.65
LAPTM4B-201ENST00000445593 PALM3A6NDB9 673 aaPredicted RBP19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 SMCO2A6NFE2 343 aa19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 SFPQP23246 707 aaKnown RBP eCLIP19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 PDE6BP35913 854 aa19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 GNAQP50148 359 aa19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 CCZ1BP86790 482 aa19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 CCZ1P86791 482 aaPredicted RBP19.09■□□□□ 0.65
LAPTM4B-201ENST00000445593 CDC42EP5Q6NZY7 148 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms