RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 ABTB2Q8N961 1025 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 FAM181AQ8N9Y4 354 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 GLIS3Q8NEA6 775 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 NEK11Q8NG66 645 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 FAM168AQ92567 244 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 MIEF2Q96C03 454 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 TSPAN18Q96SJ8 248 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 EIF3CQ99613 913 aaKnown RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 SRRTQ9BXP5 876 aaKnown RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 ZSCAN16Q9H4T2 348 aaPredicted RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 ACSS3Q9H6R3 686 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 TTC12Q9H892 705 aaPredicted RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 MBNL3Q9NUK0 354 aaKnown RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 SPATS2LQ9NUQ6 558 aaKnown RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 GNL3LQ9NVN8 582 aaKnown RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 FOXD3Q9UJU5 478 aaPredicted RBP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 TRAK1Q9UPV9 953 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 SLC5A6Q9Y289 635 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 FHOD1Q9Y613 1164 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 ANKRD30BQ9BXX2 1392 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 AQRO60306 1485 aaKnown RBP eCLIP3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 GAPVD1Q14C86 1478 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 SAMD9Q5K651 1589 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 HECW1Q76N89 1606 aa3.32□□□□□ -1.88
RPL39P40-201ENST00000445481 REREQ9P2R6 1566 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 RAD54L2Q9Y4B4 1467 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 UHRF1BP1Q6BDS2 1440 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 GPRASP1Q5JY77 1395 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 SPAG9O60271 1321 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 A0A1B0GUA9 196 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 PPFIA2O75334 1257 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 FARP2O94887 1054 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 ZRANB2O95218 330 aaKnown RBP eCLIP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 MAOBP27338 520 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 ELF1P32519 619 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 RDXP35241 583 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 CD151P48509 253 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 MCM2P49736 904 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 MNAT1P51948 309 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 DDR1Q08345 913 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 ZRSR2Q15696 482 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 TPD52L1Q16890 204 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF423Q2M1K9 1284 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 NBPF8Q3BBV2 869 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 BMP2KLQ5H9B9 411 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 AKAP4Q5JQC9 854 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 GBP6Q6ZN66 633 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 DYMQ7RTS9 669 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 KIAA1328Q86T90 577 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 PLD6Q8N2A8 252 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 TMEM87AQ8NBN3 555 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 RNF214Q8ND24 703 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 LRRN4CLQ8ND94 238 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 TCP11Q8WWU5 503 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 BORCS6Q96GS4 357 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 TRIM6Q9C030 488 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 BHLHE41Q9C0J9 482 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 SOX17Q9H6I2 414 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 RC3H2Q9HBD1 1191 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 VEZTQ9HBM0 779 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 IFT57Q9NWB7 429 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 CPSF2Q9P2I0 782 aaKnown RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 CLIP2Q9UDT6 1046 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF777Q9ULD5 760 aaPredicted RBP3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 PYCARDQ9ULZ3 195 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 DAGLAQ9Y4D2 1042 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 NUB1Q9Y5A7 615 aa3.31□□□□□ -1.88
RPL39P40-201ENST00000445481 PLXNC1O60486 1568 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 MBD5Q9P267 1494 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ROCK1Q13464 1354 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ATXN2Q99700 1313 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 KINO60870 393 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 TNFRSF21O75509 655 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 NEBLO76041 1014 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CAVIN2O95810 425 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 PAX7P23759 505 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 NF2P35240 595 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 MRPL12P52815 198 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 TUBB4BP68371 445 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 MESP2Q0VG99 397 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 GRIK3Q13003 919 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CDK5R2Q13319 367 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 SF3B2Q13435 895 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ELOAQ14241 798 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 WDR43Q15061 677 aaKnown RBP eCLIP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 PTPN14Q15678 1187 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ELF2Q15723 593 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CDC37Q16543 378 aaPredicted RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 HSP90B2PQ58FF3 399 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CCDC50Q8IVM0 306 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CCDC26Q8TAB7 109 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 BICD2Q8TD16 824 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF526Q8TF50 670 aaPredicted RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 SMARCE1Q969G3 411 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF428Q96B54 188 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 FAXDC2Q96IV6 333 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 MPHOSPH9Q99550 1183 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms