RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 MTMR4Q9NYA4 1195 aa24.26■■□□□ 1.47
UBE2D4-205ENST00000443780 ADAMTS5Q9UNA0 930 aa24.26■■□□□ 1.47
UBE2D4-205ENST00000443780 RPTORQ8N122 1335 aa24.26■■□□□ 1.47
UBE2D4-205ENST00000443780 PLIN4Q96Q06 1357 aa24.26■■□□□ 1.47
UBE2D4-205ENST00000443780 ZNF236Q9UL36 1845 aa24.26■■□□□ 1.47
UBE2D4-205ENST00000443780 F5H6K3 240 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 TSPY3P0CV98 308 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 TSPY8P0CW00 308 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 ZKSCAN1P17029 563 aaPredicted RBP24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 CAPN2P17655 700 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 CTDSPL2Q05D32 466 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 KLRC3Q07444 240 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 CCL14Q16627 93 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 FAM47AQ5JRC9 791 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 MAP3K21Q5TCX8 1036 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 SHCBP1Q8NEM2 672 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 HMX1Q9NP08 348 aaPredicted RBP24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 ANAPC4Q9UJX5 808 aa24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.25■■□□□ 1.47
UBE2D4-205ENST00000443780 SDSP20132 328 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 TFAP4Q01664 338 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 GRB14Q14449 540 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 PLS1Q14651 629 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 UBE2Q1Q7Z7E8 422 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 ZNF589Q86UQ0 364 aaPredicted RBP24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 PPP1R9AQ9ULJ8 1098 aa24.24■■□□□ 1.47
UBE2D4-205ENST00000443780 TTLL1O95922 423 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 NDUFB10O96000 172 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 FGAP02671 866 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 TFRCP02786 760 aaKnown RBP24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 PRKAR2AP13861 404 aaKnown RBP24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 ERCC3P19447 782 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 NUP88Q99567 741 aaPredicted RBP24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 CRISPLD2Q9H0B8 497 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 INCENPQ9NQS7 918 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 SYNPO2Q9UMS6 1093 aa24.23■■□□□ 1.47
UBE2D4-205ENST00000443780 PLXNA1Q9UIW2 1896 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 CCDC171Q6TFL3 1326 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 STRNO43815 780 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 HOXC6P09630 235 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 HSPD1P10809 573 aaKnown RBP24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 TMEM132BQ14DG7 1078 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 MROH8Q9H579 483 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 TACC3Q9Y6A5 838 aa24.22■■□□□ 1.47
UBE2D4-205ENST00000443780 VWA5AO00534 786 aa24.21■■□□□ 1.47
UBE2D4-205ENST00000443780 FARP2O94887 1054 aaPredicted RBP24.21■■□□□ 1.47
UBE2D4-205ENST00000443780 CACNB2Q08289 660 aaPredicted RBP24.21■■□□□ 1.47
UBE2D4-205ENST00000443780 FRMPD3Q5JV73 1810 aa24.21■■□□□ 1.47
UBE2D4-205ENST00000443780 ZMYM6O95789 1325 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 FGRP09769 529 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 PDE4AP27815 886 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 NCAPG2Q86XI2 1143 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 LRRC47Q8N1G4 583 aaKnown RBP24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 NPLOC4Q8TAT6 608 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 SLF1Q9BQI6 1058 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 FLRT1Q9NZU1 646 aa24.2■■□□□ 1.46
UBE2D4-205ENST00000443780 TSPY2A6NKD2 308 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 ORC4O43929 436 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 ADORA2AP29274 412 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 MFAP1P55081 439 aaKnown RBP24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 GMCL1P1Q8NEA9 526 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 REPS2Q8NFH8 660 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 LAMA4Q16363 1823 aa24.19■■□□□ 1.46
UBE2D4-205ENST00000443780 RANBP6O60518 1105 aaKnown RBP24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 SLC25A27O95847 323 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 STAT3P40763 770 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 PPP4R3BQ5MIZ7 849 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 MFSD14CQ5VZR4 134 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 DPP9Q86TI2 863 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 RIOX2Q8IUF8 465 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 PRPF38AQ8NAV1 312 aaKnown RBP24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 IL17RBQ9NRM6 502 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 DIAPH3Q9NSV4 1193 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 ZNF214Q9UL59 606 aaPredicted RBP24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 ALPK3Q96L96 1907 aa24.18■■□□□ 1.46
UBE2D4-205ENST00000443780 HIP1O00291 1037 aa24.17■■□□□ 1.46
UBE2D4-205ENST00000443780 SLFN13Q68D06 897 aa24.17■■□□□ 1.46
UBE2D4-205ENST00000443780 CWC27Q6UX04 472 aaKnown RBP24.17■■□□□ 1.46
UBE2D4-205ENST00000443780 ABRAQ8N0Z2 381 aa24.17■■□□□ 1.46
UBE2D4-205ENST00000443780 NMT2O60551 498 aa24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 CCND3P30281 292 aaPredicted RBP24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 ANKLE1Q8NAG6 615 aa24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 HTATIP2Q9BUP3 242 aa24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 STX8Q9UNK0 236 aa24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 SMCHD1A6NHR9 2005 aa24.16■■□□□ 1.46
UBE2D4-205ENST00000443780 COBLO75128 1261 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 IGHA2P01877 340 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 FCER1AP12319 257 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 BMP3P12645 472 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 HAND2P61296 217 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 TOMM22Q9NS69 142 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 SLC5A4Q9NY91 659 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 FEM1BQ9UK73 627 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 OGDHLQ9ULD0 1010 aa24.15■■□□□ 1.46
UBE2D4-205ENST00000443780 COPB2P35606 906 aa24.14■■□□□ 1.45
UBE2D4-205ENST00000443780 TTC22Q5TAA0 569 aa24.14■■□□□ 1.45
UBE2D4-205ENST00000443780 OLFML2BQ68BL8 750 aa24.14■■□□□ 1.45
UBE2D4-205ENST00000443780 DPF3Q92784 378 aa24.14■■□□□ 1.45
UBE2D4-205ENST00000443780 PAWRQ96IZ0 340 aaKnown RBP24.14■■□□□ 1.45
UBE2D4-205ENST00000443780 CYP2C19P33261 490 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms