RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 CEP85Q6P2H3 762 aa25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 ERC1Q8IUD2 1116 aa25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 ITPRIPQ8IWB1 547 aa25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 LCORLQ8N3X6 602 aa25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 RNPC3Q96LT9 517 aaKnown RBP25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 ADAMTS5Q9UNA0 930 aa25.1■■□□□ 1.61
POLR2J3-202ENST00000443430 WDR46O15213 610 aaKnown RBP25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 SLC25A27O95847 323 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 PGK1P00558 417 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 ICA1Q05084 483 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 SAMD1Q6SPF0 538 aaPredicted RBP25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 RNF180Q86T96 592 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 MMP19Q99542 508 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 PRDM6Q9NQX0 595 aa25.09■■□□□ 1.61
POLR2J3-202ENST00000443430 PGK2P07205 417 aa25.08■■□□□ 1.61
POLR2J3-202ENST00000443430 TAL1P17542 331 aaPredicted RBP25.08■■□□□ 1.61
POLR2J3-202ENST00000443430 TINF2Q9BSI4 451 aa25.08■■□□□ 1.61
POLR2J3-202ENST00000443430 SH2D4AQ9H788 454 aa25.08■■□□□ 1.61
POLR2J3-202ENST00000443430 IL1RAPL2Q9NP60 686 aa25.08■■□□□ 1.61
POLR2J3-202ENST00000443430 BAZ2AQ9UIF9 1905 aaKnown RBP25.08■■□□□ 1.6
POLR2J3-202ENST00000443430 A0A1W2PQ45 241 aaPredicted RBP25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 A0A1W2PQY0 241 aa25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 CCER2I3L3R5 266 aa25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 RAG1P15918 1043 aa25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 ZNF792Q3KQV3 632 aa25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 DIS3Q9Y2L1 958 aaKnown RBP25.07■■□□□ 1.6
POLR2J3-202ENST00000443430 ROBO3Q96MS0 1386 aa25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 SMIM22K7EJ46 135 aa25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 PQBP1O60828 265 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 ZNF865P0CJ78 1059 aaPredicted RBP25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 RIOX2Q8IUF8 465 aa25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 ARMT1Q9H993 441 aa25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 FBXO28Q9NVF7 368 aa25.06■■□□□ 1.6
POLR2J3-202ENST00000443430 GOLIM4O00461 696 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 PRKAB2O43741 272 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 FPGSQ05932 587 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 KCTD2Q14681 263 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 GRIN2CQ14957 1233 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 RHPN1Q8TCX5 695 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 SYMPKQ92797 1274 aaKnown RBP25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 CCDC17Q96LX7 622 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 TMEM39AQ9NV64 488 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 MYO9BQ13459 2157 aa25.05■■□□□ 1.6
POLR2J3-202ENST00000443430 ADAMTS4O75173 837 aa25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 AKR1A1P14550 325 aa25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 FAAP100Q0VG06 881 aa25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 LENG1Q96BZ8 264 aaPredicted RBP25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 DNAJC2Q99543 621 aaKnown RBP25.04■■□□□ 1.6
POLR2J3-202ENST00000443430 VWA5AO00534 786 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 EEF2P13639 858 aaKnown RBP25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 STAT3P40763 770 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 CDK8P49336 464 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 SLFNL1Q499Z3 407 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 ANKRD33Q7Z3H0 272 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 USP38Q8NB14 1042 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 TOX2Q96NM4 488 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 ATP8A2Q9NTI2 1148 aa25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 ZNF214Q9UL59 606 aaPredicted RBP25.03■■□□□ 1.6
POLR2J3-202ENST00000443430 CYP2D7A0A087X1C5 515 aa25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 DNAJB2P25686 324 aa25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 C12orf60Q5U649 245 aa25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 REPS2Q8NFH8 660 aa25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 TSEN34Q9BSV6 310 aaKnown RBP25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 PPP1R9AQ9ULJ8 1098 aa25.02■■□□□ 1.6
POLR2J3-202ENST00000443430 ACLYP53396 1101 aa25.01■■□□□ 1.59
POLR2J3-202ENST00000443430 HSP90AB4PQ58FF6 505 aa25.01■■□□□ 1.59
POLR2J3-202ENST00000443430 MBD4O95243 580 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 ADD2P35612 726 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 C16orf86Q6ZW13 317 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 CLASRPQ8N2M8 674 aaKnown RBP25■■□□□ 1.59
POLR2J3-202ENST00000443430 KLHDC9Q8NEP7 349 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 KANSL2Q9H9L4 492 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 STARD7Q9NQZ5 370 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 CNPY2Q9Y2B0 182 aa25■■□□□ 1.59
POLR2J3-202ENST00000443430 DCDC2CA8MYV0 355 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 USP17L12C9JPN9 530 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 USP17L21D6R901 530 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 COPB2P35606 906 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 CCSAPQ6IQ19 270 aaPredicted RBP24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 ZNF576Q9H609 170 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 SYNRGQ9UMZ2 1314 aa24.99■■□□□ 1.59
POLR2J3-202ENST00000443430 MUC3AQ02505 3323 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 TIMP1P01033 207 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 TJAP1Q5JTD0 557 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 FAM83BQ5T0W9 1011 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 MSL3Q8N5Y2 521 aaKnown RBP24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 NUP133Q8WUM0 1156 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 GOPCQ9HD26 462 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 TBX21Q9UL17 535 aa24.98■■□□□ 1.59
POLR2J3-202ENST00000443430 MOXD2PA6NHM9 499 aa24.97■■□□□ 1.59
POLR2J3-202ENST00000443430 SNAI1O95863 264 aaPredicted RBP24.97■■□□□ 1.59
POLR2J3-202ENST00000443430 IFIT2P09913 472 aaKnown RBP24.97■■□□□ 1.59
POLR2J3-202ENST00000443430 KCNA10Q16322 511 aa24.97■■□□□ 1.59
POLR2J3-202ENST00000443430 TIFAQ96CG3 184 aa24.97■■□□□ 1.59
POLR2J3-202ENST00000443430 KIF1BPQ96EK5 621 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms