RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 APOA5Q6Q788 366 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 TMTC2Q8N394 836 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 AGTPBP1Q9UPW5 1226 aa15.85■□□□□ 0.13
TM9SF4-204ENST00000442842 MYH4Q9Y623 1939 aa15.84■□□□□ 0.13
TM9SF4-204ENST00000442842 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
TM9SF4-204ENST00000442842 GMCL1Q96IK5 515 aa15.84■□□□□ 0.13
TM9SF4-204ENST00000442842 AGXT2Q9BYV1 514 aa15.84■□□□□ 0.13
TM9SF4-204ENST00000442842 GPCPD1Q9NPB8 672 aa15.84■□□□□ 0.13
TM9SF4-204ENST00000442842 BTBD19C9JJ37 291 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 ZNF543Q08ER8 600 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 PABPC4Q13310 644 aaKnown RBP eCLIP15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 GPAT2Q6NUI2 795 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 CTCFLQ8NI51 663 aaPredicted RBP15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.12
TM9SF4-204ENST00000442842 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 PDHXO00330 501 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 FLOT1O75955 427 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 CALM1P0DP23 149 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 CALM2P0DP24 149 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 CALM3P0DP25 149 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 SNHG28P0DPA3 235 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 TROAPQ12815 778 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 GRM4Q14833 912 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 RTN1Q16799 776 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 ASPRV1Q53RT3 343 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 ANKRD23Q86SG2 305 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 FBXL16Q8N461 479 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 PTPN18Q99952 460 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 ALDH8A1Q9H2A2 487 aaPredicted RBP15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 FBXO28Q9NVF7 368 aa15.82■□□□□ 0.12
TM9SF4-204ENST00000442842 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 CD2BP2O95400 341 aaKnown RBP15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 LARGE1O95461 756 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 OSBPP22059 807 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 SLC16A2P36021 539 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 TTBK2Q6IQ55 1244 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 IFNL1Q8IU54 200 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 STAG2Q8N3U4 1231 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 KIFC2Q96AC6 838 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 CPVLQ9H3G5 476 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 PNMA3Q9UL41 463 aa15.81■□□□□ 0.12
TM9SF4-204ENST00000442842 PTPRFP10586 1907 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 CYP2C8P10632 490 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 PDIA3P30101 505 aaKnown RBP15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 KIF5BP33176 963 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 STAT2P52630 851 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 INHBEP58166 350 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 OTUD7BQ6GQQ9 843 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 CATSPERGQ6ZRH7 1159 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 CMTR1Q8N1G2 835 aaKnown RBP15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 ASCC2Q9H1I8 757 aaPredicted RBP15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 NCOA5Q9HCD5 579 aaKnown RBP15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
TM9SF4-204ENST00000442842 MAP2K2P36507 400 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 TAF1CQ15572 869 aaPredicted RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 CCDC82Q8N4S0 544 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 SMCR8Q8TEV9 937 aaPredicted RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 ZNF274Q96GC6 653 aaPredicted RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 PARK7Q99497 189 aaKnown RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 RBM28Q9NW13 759 aaKnown RBP15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 FEM1BQ9UK73 627 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 LIMCH1Q9UPQ0 1083 aa15.79■□□□□ 0.12
TM9SF4-204ENST00000442842 NID2Q14112 1375 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 PALM3A6NDB9 673 aaPredicted RBP15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 KLRF2D3W0D1 207 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 CDC27P30260 824 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 TM4SF4P48230 202 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 RCAN1P53805 252 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 EVCP57679 992 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 SNAP25P60880 206 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 SCRN1Q12765 414 aa15.78■□□□□ 0.12
TM9SF4-204ENST00000442842 ME3Q16798 604 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms