RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 MAD2L2Q9UI95 211 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 IGKV6D-41A0A0C4DH26 115 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 YDJCA8MPS7 323 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 GOLGA6L19H0YKK7 550 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 NOVP48745 357 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 ICA1Q05084 483 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 ORC2Q13416 577 aaPredicted RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 FAM200AQ8TCP9 573 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS50-205ENST00000441602 VEZTQ9HBM0 779 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 ATRNL1Q5VV63 1379 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 ESYT2A0FGR8 921 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 NR1I2O75469 434 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 PTMAP06454 111 aaKnown RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 MARCKSP29966 332 aaPredicted RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 EVX2Q03828 476 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 NFIAQ12857 509 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 CAMK4Q16566 473 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 FAM83AQ86UY5 434 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 FTOQ9C0B1 505 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS50-205ENST00000441602 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 GINM1Q9NU53 330 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 BARHL2Q9NY43 387 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 FAM198AQ9UFP1 575 aa6.89□□□□□ -1.31
VPS50-205ENST00000441602 DDX60LQ5H9U9 1706 aaKnown RBP6.89□□□□□ -1.31
VPS50-205ENST00000441602 KCNA3P22001 575 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 PTPREP23469 700 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 SPDYE2Q495Y8 402 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 RBM43Q6ZSC3 357 aaKnown RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 HOMER1Q86YM7 354 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 TCHHQ07283 1943 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 hCG_1642624A0A1W2PR95 340 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 BECN2A8MW95 431 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 TCP10L2B9ZVM9 353 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 RAD21O60216 631 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 PDHBP11177 359 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 PFKFB1P16118 471 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 ADCY7P51828 1080 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 IKQ13123 557 aaPredicted RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 NR5A1Q13285 461 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 NONOQ15233 471 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS50-205ENST00000441602 PTPAQ15257 358 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 SLFN13Q68D06 897 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 CKAP2LQ8IYA6 745 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 STAG2Q8N3U4 1231 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 GMLQ99445 158 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 DACH1Q9UI36 760 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 SRPRBQ9Y5M8 271 aaKnown RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 MYH15Q9Y2K3 1946 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 PNMA6FA0A0J9YX94 578 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 A0A1B0GVL5 298 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 GOLGA6L6A8MZA4 724 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 LAD1O00515 517 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 ZNF202O95125 648 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 SMC2O95347 1197 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 SLC1A4P43007 532 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 MRPL12P52815 198 aaKnown RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 CACNB3P54284 484 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 CXCL9Q07325 125 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 PIK3AP1Q6ZUJ8 805 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 FMR1NBQ8N0W7 255 aaPredicted RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 PRMT6Q96LA8 375 aaPredicted RBP6.88□□□□□ -1.31
VPS50-205ENST00000441602 VAT1LQ9HCJ6 419 aa6.88□□□□□ -1.31
VPS50-205ENST00000441602 FOCADQ5VW36 1801 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 FAM237AA0A1B0GTK4 181 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 STXBP3O00186 592 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 TPM3P06753 285 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 WWC2Q6AWC2 1192 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 TATDN1Q6P1N9 297 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 ELOA2Q8IYF1 753 aaPredicted RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 CNNM3Q8NE01 707 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 ENGASEQ8NFI3 743 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 MKL1Q969V6 931 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 SPON1Q9HCB6 807 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 KCNH3Q9ULD8 1083 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 KIF13BQ9NQT8 1826 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 CLRN2A0PK11 232 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 SMCO2A6NFE2 343 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 H7C1D1 291 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 GOLGA8HP0CJ92 632 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 SNHG28P0DPA3 235 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 ARL6IP4Q66PJ3 421 aaKnown RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 REXO1Q8N1G1 1221 aaKnown RBP6.87□□□□□ -1.31
VPS50-205ENST00000441602 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
VPS50-205ENST00000441602 DPF2Q92785 391 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms