RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RLFQ13129 1914 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 SEPT4O43236 478 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 LRRFIP1Q32MZ4 808 aaKnown RBP13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 LRIT3Q3SXY7 679 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 RIOX2Q8IUF8 465 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 TDHQ8IZJ6 230 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 UBE2OQ9C0C9 1292 aaKnown RBP13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 FBXO28Q9NVF7 368 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 PPP1R9AQ9ULJ8 1098 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
UBE2D4-204ENST00000440899 COL6A3P12111 3177 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 VWA5AO00534 786 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 RAD21O60216 631 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 GNAT2P19087 354 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 RASA1P20936 1047 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 COPB2P35606 906 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 STAT3P40763 770 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 MAML3Q96JK9 1138 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 ZNF287Q9HBT7 754 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
UBE2D4-204ENST00000440899 A0A0G2JMZ2 1700 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 MYH8P13535 1937 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 GPAA1O43292 621 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 PRAMEF19Q5SWL8 479 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 GJC2Q5T442 439 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 MMP19Q99542 508 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 DIS3Q9Y2L1 958 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 MYH7P12883 1935 aa13.9□□□□□ -0.18
UBE2D4-204ENST00000440899 ERC2O15083 957 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 APPP05067 770 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 TDO2P48775 406 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 KCTD2Q14681 263 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 ANO1Q5XXA6 986 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 REPS2Q8NFH8 660 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
UBE2D4-204ENST00000440899 PATL2C9JE40 543 aaKnown RBP13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 F5H6K3 240 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 PGK2P07205 417 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 RTP1P59025 263 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 KLRC3Q07444 240 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 LRRC41Q15345 812 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 ZNF792Q3KQV3 632 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 PRPF38AQ8NAV1 312 aaKnown RBP13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 TINF2Q9BSI4 451 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 PRKAG2Q9UGJ0 569 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
UBE2D4-204ENST00000440899 IGKV6D-41A0A0C4DH26 115 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 M0R2C6 588 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 NDUFB10O96000 172 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 IFNL3Q8IZI9 196 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 MKL1Q969V6 931 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 TEX13BQ9BXU2 312 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
UBE2D4-204ENST00000440899 FRMPD3Q5JV73 1810 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 ZBED4O75132 1171 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 PRDM1O75626 825 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 RARBP10826 455 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 ADCYAP1R1P41586 468 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 DEFB123Q8N688 67 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 PI4K2BQ8TCG2 481 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 CEP95Q96GE4 821 aa13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
UBE2D4-204ENST00000440899 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 TTLL1O95922 423 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 SLC3A2P08195 630 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 PDE4BQ07343 736 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 ZMYM1Q5SVZ6 1142 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 C1orf53Q5VUE5 145 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-204ENST00000440899 FSD1Q9BTV5 496 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms