RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CHAF1AQ13111 956 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ZRSR1Q15695 479 aaKnown RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 KIF4BQ2VIQ3 1234 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 RILPL1Q5EBL4 403 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ANGEL2Q5VTE6 544 aaKnown RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 NOSTRINQ8IVI9 506 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 CEP57L1Q8IYX8 460 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ENGASEQ8NFI3 743 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 FAM122AQ96E09 287 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 TIGD1Q96MW7 591 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 MAP3K14Q99558 947 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 NAT10Q9H0A0 1025 aaKnown RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ATP6V0A2Q9Y487 856 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 PTCH2Q9Y6C5 1203 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 ZNF646O15015 1829 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 PSME4Q14997 1843 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 FAM237AA0A1B0GTK4 181 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 UFL1O94874 794 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 IL1R1P14778 569 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 KIF5BP33176 963 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 PPP4CP60510 307 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 SLC9C1Q4G0N8 1177 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 CTR9Q6PD62 1173 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 ENAHQ8N8S7 591 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 SUPT20HQ8NEM7 779 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 CTCFLQ8NI51 663 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 ZNF384Q8TF68 577 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC6-209ENST00000440653 PCDHA7Q9UN72 937 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 PLIN4Q96Q06 1357 aa10.51□□□□□ -0.73
HDAC6-209ENST00000440653 KIF28PB7ZC32 967 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 ZNF500O60304 480 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 CUTAO60888 179 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 DTNBO60941 627 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 CMA1P23946 247 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 USP5P45974 858 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 DYNLL1P63167 89 aaKnown RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 ANO6Q4KMQ2 910 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 NBPF11Q86T75 865 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 CRACR2BQ8N4Y2 399 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 SH3TC2Q8TF17 1288 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 PHKBQ93100 1093 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 CCDC34Q96HJ3 373 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 GOLPH3LQ9H4A5 285 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
HDAC6-209ENST00000440653 GAKO14976 1311 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 FAM205AQ6ZU69 1335 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 CNTNAP5Q8WYK1 1306 aa10.5□□□□□ -0.73
HDAC6-209ENST00000440653 GREB1LQ9C091 1923 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 USP17L21D6R901 530 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 GOLGA6L19H0YKK7 550 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 PRPF3O43395 683 aaKnown RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 ADCY5O95622 1261 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 RXRAP19793 462 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 CDC25BP30305 580 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 ZNF165P49910 485 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 GNAQP50148 359 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 CAMK4Q16566 473 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 SARM1Q6SZW1 724 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 DGKHQ86XP1 1220 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 DIS3L2Q8IYB7 885 aaKnown RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 ELOA2Q8IYF1 753 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 BPIFA3Q9BQP9 254 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 MYL10Q9BUA6 226 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 FTOQ9C0B1 505 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-209ENST00000440653 DBNDD1Q9H9R9 158 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 CLIC4Q9Y696 253 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 TACC3Q9Y6A5 838 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 MYO3BQ8WXR4 1341 aa10.49□□□□□ -0.73
HDAC6-209ENST00000440653 TSPY2A6NKD2 308 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-209ENST00000440653 KRT2P35908 639 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms