RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 NDUFB10O96000 172 aa32.33■■■□□ 2.77
CGREF1-207ENST00000440612 DNM1Q05193 864 aaKnown RBP32.33■■■□□ 2.77
CGREF1-207ENST00000440612 CCDC84Q86UT8 332 aaPredicted RBP32.33■■■□□ 2.77
CGREF1-207ENST00000440612 DCAF4Q8WV16 495 aa32.33■■■□□ 2.77
CGREF1-207ENST00000440612 GLIS2Q9BZE0 524 aaPredicted RBP32.33■■■□□ 2.77
CGREF1-207ENST00000440612 UBA5Q9GZZ9 404 aa32.33■■■□□ 2.77
CGREF1-207ENST00000440612 GINM1Q9NU53 330 aa32.33■■■□□ 2.77
CGREF1-207ENST00000440612 MYH6P13533 1939 aa32.33■■■□□ 2.77
CGREF1-207ENST00000440612 ATAD5Q96QE3 1844 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 IQCA1LA6NCM1 817 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 SCG2P13521 617 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 NBR1Q14596 966 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 KIAA1755Q5JYT7 1200 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 TTBK2Q6IQ55 1244 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 GMCL1Q96IK5 515 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 GPCPD1Q9NPB8 672 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 RBM27Q9P2N5 1060 aaKnown RBP32.32■■■□□ 2.76
CGREF1-207ENST00000440612 KCNJ14Q9UNX9 436 aa32.32■■■□□ 2.76
CGREF1-207ENST00000440612 GPATCH4Q5T3I0 446 aaKnown RBP32.31■■■□□ 2.76
CGREF1-207ENST00000440612 PIBF1Q8WXW3 757 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 ARHGEF10LQ9HCE6 1279 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 VPS54Q9P1Q0 977 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 MMP1P03956 469 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 SUPT20HL1Q3ZLR7 823 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 KCTD1Q719H9 257 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 SULF1Q8IWU6 871 aa32.31■■■□□ 2.76
CGREF1-207ENST00000440612 KLRG1Q96E93 195 aa32.3■■■□□ 2.76
CGREF1-207ENST00000440612 CNPY2Q9Y2B0 182 aa32.3■■■□□ 2.76
CGREF1-207ENST00000440612 NPY5RQ15761 445 aa32.29■■■□□ 2.76
CGREF1-207ENST00000440612 KRT26Q7Z3Y9 468 aa32.29■■■□□ 2.76
CGREF1-207ENST00000440612 PHF20Q9BVI0 1012 aa32.29■■■□□ 2.76
CGREF1-207ENST00000440612 DDX11L8A8MPP1 907 aa32.28■■■□□ 2.76
CGREF1-207ENST00000440612 U2AF2P26368 475 aaKnown RBP eCLIP32.28■■■□□ 2.76
CGREF1-207ENST00000440612 SLC1A4P43007 532 aa32.28■■■□□ 2.76
CGREF1-207ENST00000440612 TRIM29Q14134 588 aa32.28■■■□□ 2.76
CGREF1-207ENST00000440612 CCDC96Q2M329 555 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 TYW1BQ6NUM6 668 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 ZKSCAN4Q969J2 545 aaPredicted RBP32.27■■■□□ 2.76
CGREF1-207ENST00000440612 WRNIP1Q96S55 665 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 NUP88Q99567 741 aaPredicted RBP32.27■■■□□ 2.76
CGREF1-207ENST00000440612 LMBRD1Q9NUN5 540 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 USP2O75604 605 aaPredicted RBP32.27■■■□□ 2.76
CGREF1-207ENST00000440612 MTMR8Q96EF0 704 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 PIGSQ96S52 555 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 JMJD4Q9H9V9 463 aa32.27■■■□□ 2.76
CGREF1-207ENST00000440612 SCYL3Q8IZE3 742 aa32.26■■■□□ 2.75
CGREF1-207ENST00000440612 VCPKMTQ9H867 229 aa32.26■■■□□ 2.75
CGREF1-207ENST00000440612 GDPD2Q9HCC8 539 aa32.26■■■□□ 2.75
CGREF1-207ENST00000440612 DOCK1Q14185 1865 aa32.26■■■□□ 2.75
CGREF1-207ENST00000440612 SLC16A2P36021 539 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 WWC2Q6AWC2 1192 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 USP48Q86UV5 1035 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 ADGRF4Q8IZF3 695 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.25■■■□□ 2.75
CGREF1-207ENST00000440612 GPKOWQ92917 476 aaPredicted RBP eCLIP32.25■■■□□ 2.75
CGREF1-207ENST00000440612 VAT1LQ9HCJ6 419 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 TCHHQ07283 1943 aa32.25■■■□□ 2.75
CGREF1-207ENST00000440612 BTBD18B2RXH4 712 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 PNMA8AQ86V59 439 aaPredicted RBP32.24■■■□□ 2.75
CGREF1-207ENST00000440612 DIS3L2Q8IYB7 885 aaKnown RBP32.24■■■□□ 2.75
CGREF1-207ENST00000440612 SPICE1Q8N0Z3 855 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 TMEM87AQ8NBN3 555 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 OXER1Q8TDS5 423 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 PAPPA2Q9BXP8 1791 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 RAD21O60216 631 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 POTEIP0CG38 1075 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 POTEJP0CG39 1038 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 EAPPQ56P03 285 aaPredicted RBP32.24■■■□□ 2.75
CGREF1-207ENST00000440612 BRAPQ7Z569 592 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 RRP36Q96EU6 259 aaKnown RBP32.24■■■□□ 2.75
CGREF1-207ENST00000440612 SH3GLB2Q9NR46 395 aa32.24■■■□□ 2.75
CGREF1-207ENST00000440612 STXBP3O00186 592 aa32.23■■■□□ 2.75
CGREF1-207ENST00000440612 BMP3P12645 472 aa32.23■■■□□ 2.75
CGREF1-207ENST00000440612 NOL9Q5SY16 702 aaKnown RBP32.23■■■□□ 2.75
CGREF1-207ENST00000440612 GOPCQ9HD26 462 aa32.23■■■□□ 2.75
CGREF1-207ENST00000440612 BARHL2Q9NY43 387 aa32.23■■■□□ 2.75
CGREF1-207ENST00000440612 XBP1P17861 261 aa32.22■■■□□ 2.75
CGREF1-207ENST00000440612 BTNL9Q6UXG8 535 aa32.22■■■□□ 2.75
CGREF1-207ENST00000440612 HOMER1Q86YM7 354 aa32.22■■■□□ 2.75
CGREF1-207ENST00000440612 CDCA5Q96FF9 252 aa32.22■■■□□ 2.75
CGREF1-207ENST00000440612 SH2D4AQ9H788 454 aa32.22■■■□□ 2.75
CGREF1-207ENST00000440612 TFIP11Q9UBB9 837 aaKnown RBP32.22■■■□□ 2.75
CGREF1-207ENST00000440612 USP17L10C9JJH3 530 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 GOLGA6L22H0YM25 854 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 ADAMTS3O15072 1205 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 PRPF40AO75400 957 aaKnown RBP32.21■■■□□ 2.75
CGREF1-207ENST00000440612 PTPRAP18433 802 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 KIAA1683Q9H0B3 1180 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 FOXP1Q9H334 677 aaPredicted RBP32.21■■■□□ 2.75
CGREF1-207ENST00000440612 MYH15Q9Y2K3 1946 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 KRT85P78386 507 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 NR5A1Q13285 461 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 MYSM1Q5VVJ2 828 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 TNFRSF25Q93038 417 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 WDR18Q9BV38 432 aa32.21■■■□□ 2.75
CGREF1-207ENST00000440612 PPP1R11O60927 126 aaPredicted RBP32.2■■■□□ 2.74
CGREF1-207ENST00000440612 PRKG1Q13976 671 aa32.2■■■□□ 2.74
CGREF1-207ENST00000440612 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.2■■■□□ 2.74
CGREF1-207ENST00000440612 FTOQ9C0B1 505 aaKnown RBP eCLIP32.2■■■□□ 2.74
CGREF1-207ENST00000440612 FIBPO43427 364 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms