RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PTCH2Q9Y6C5 1203 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 Q3C1V9 767 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 RCSD1Q6JBY9 416 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 KRT23Q9C075 422 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 ISY1Q9ULR0 285 aaKnown RBP21.26■□□□□ 0.99
CPSF4-205ENST00000440514 HPS5Q9UPZ3 1129 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 MTMR7Q9Y216 660 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 MYPNQ86TC9 1320 aa21.26■□□□□ 0.99
CPSF4-205ENST00000440514 E7EWF7 191 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 GNRH1P01148 92 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 PRKCZQ05513 592 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 PORCNQ9H237 461 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 HOXC10Q9NYD6 342 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 SRRDQ9UH36 339 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 PPP1R9AQ9ULJ8 1098 aa21.25■□□□□ 0.99
CPSF4-205ENST00000440514 TOP1P11387 765 aaKnown RBP21.24■□□□□ 0.99
CPSF4-205ENST00000440514 NT5C2P49902 561 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 CYB5R4Q7L1T6 521 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 SLF1Q9BQI6 1058 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 ZSWIM5Q9P217 1185 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 GABRQQ9UN88 632 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 PLXNB2O15031 1838 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 TNKSO95271 1327 aa21.24■□□□□ 0.99
CPSF4-205ENST00000440514 SLC27A2O14975 620 aa21.23■□□□□ 0.99
CPSF4-205ENST00000440514 BMP3P12645 472 aa21.23■□□□□ 0.99
CPSF4-205ENST00000440514 MCCP23508 829 aa21.23■□□□□ 0.99
CPSF4-205ENST00000440514 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
CPSF4-205ENST00000440514 GMCL1Q96IK5 515 aa21.23■□□□□ 0.99
CPSF4-205ENST00000440514 ZSCAN10Q96SZ4 725 aaPredicted RBP21.23■□□□□ 0.99
CPSF4-205ENST00000440514 SLC1A4P43007 532 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 TRDNQ13061 729 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 CCDC96Q2M329 555 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 CREB3L3Q68CJ9 461 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 KCTD1Q719H9 257 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
CPSF4-205ENST00000440514 MB21D1Q8N884 522 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 ENAHQ8N8S7 591 aaPredicted RBP21.22■□□□□ 0.99
CPSF4-205ENST00000440514 COA7Q96BR5 231 aa21.22■□□□□ 0.99
CPSF4-205ENST00000440514 TMEM232C9JQI7 657 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 CAPN15O75808 1086 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 HOXD10P28358 340 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 PRMT2P55345 433 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 PLS1Q14651 629 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 NECTIN1Q15223 517 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 NCOA7Q8NI08 942 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 KIFC2Q96AC6 838 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 TTC14Q96N46 770 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 UBAC1Q9BSL1 405 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 ADAMTS5Q9UNA0 930 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 DOCK3Q8IZD9 2030 aa21.21■□□□□ 0.99
CPSF4-205ENST00000440514 VWA5AO00534 786 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 MAPK4P31152 587 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 FLT3LGP49771 235 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 CCNA1P78396 465 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 TMEM132BQ14DG7 1078 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 WDR78Q5VTH9 848 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 DGKHQ86XP1 1220 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 CCAR1Q8IX12 1150 aaKnown RBP21.2■□□□□ 0.98
CPSF4-205ENST00000440514 REPS2Q8NFH8 660 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 RAET1EQ8TD07 263 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 DCAF4Q8WV16 495 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 MOV10L1Q9BXT6 1211 aaKnown RBP21.2■□□□□ 0.98
CPSF4-205ENST00000440514 SPATC1LQ9H0A9 340 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 FEM1BQ9UK73 627 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 FRMPD2Q68DX3 1309 aaPredicted RBP21.2■□□□□ 0.98
CPSF4-205ENST00000440514 HTTP42858 3142 aa21.2■□□□□ 0.98
CPSF4-205ENST00000440514 STAT2P52630 851 aa21.19■□□□□ 0.98
CPSF4-205ENST00000440514 IKQ13123 557 aaPredicted RBP21.19■□□□□ 0.98
CPSF4-205ENST00000440514 COL9A3Q14050 684 aaPredicted RBP21.19■□□□□ 0.98
CPSF4-205ENST00000440514 CCDC178Q5BJE1 867 aa21.19■□□□□ 0.98
CPSF4-205ENST00000440514 CHST3Q7LGC8 479 aa21.19■□□□□ 0.98
CPSF4-205ENST00000440514 MB21D2Q8IYB1 491 aaPredicted RBP21.19■□□□□ 0.98
CPSF4-205ENST00000440514 CWC22Q9HCG8 908 aaKnown RBP21.19■□□□□ 0.98
CPSF4-205ENST00000440514 CCDC85CA6NKD9 419 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 PDHBP11177 359 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 ANTXR2P58335 489 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 SEC23AQ15436 765 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 SLC9C1Q4G0N8 1177 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 PLEKHH3Q7Z736 793 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 PRPF38AQ8NAV1 312 aaKnown RBP21.18■□□□□ 0.98
CPSF4-205ENST00000440514 PNMA1Q8ND90 353 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 SH3TC2Q8TF17 1288 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 KAT14Q9H8E8 782 aa21.18■□□□□ 0.98
CPSF4-205ENST00000440514 ZNF214Q9UL59 606 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-205ENST00000440514 TTBK2Q6IQ55 1244 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 FAM160B2Q86V87 743 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 ANKS1AQ92625 1134 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 GPCPD1Q9NPB8 672 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 GJD2Q9UKL4 321 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 ZNF236Q9UL36 1845 aa21.17■□□□□ 0.98
CPSF4-205ENST00000440514 IFIT3O14879 490 aaKnown RBP21.16■□□□□ 0.98
CPSF4-205ENST00000440514 ELNP15502 786 aa21.16■□□□□ 0.98
CPSF4-205ENST00000440514 ERCC3P19447 782 aa21.16■□□□□ 0.98
CPSF4-205ENST00000440514 IFIT1BQ5T764 474 aaKnown RBP21.16■□□□□ 0.98
CPSF4-205ENST00000440514 RNF20Q5VTR2 975 aa21.16■□□□□ 0.98
CPSF4-205ENST00000440514 NCAPG2Q86XI2 1143 aa21.16■□□□□ 0.98
CPSF4-205ENST00000440514 SENP2Q9HC62 589 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms