RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 WDR46O15213 610 aaKnown RBP24.91■■□□□ 1.58
TRIM39-210ENST00000440271 PGK1P00558 417 aa24.91■■□□□ 1.58
TRIM39-210ENST00000440271 RNF180Q86T96 592 aa24.91■■□□□ 1.58
TRIM39-210ENST00000440271 MMP19Q99542 508 aa24.91■■□□□ 1.58
TRIM39-210ENST00000440271 ADAMTS5Q9UNA0 930 aa24.91■■□□□ 1.58
TRIM39-210ENST00000440271 PRUNE2Q8WUY3 3088 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 SMCHD1A6NHR9 2005 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 TMEM265A0A087WTH1 108 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 KIAA0355O15063 1070 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 PGK2P07205 417 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 TINF2Q9BSI4 451 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 ARMT1Q9H993 441 aa24.9■■□□□ 1.58
TRIM39-210ENST00000440271 GOLIM4O00461 696 aa24.89■■□□□ 1.58
TRIM39-210ENST00000440271 RAG1P15918 1043 aa24.89■■□□□ 1.58
TRIM39-210ENST00000440271 TAL1P17542 331 aaPredicted RBP24.89■■□□□ 1.58
TRIM39-210ENST00000440271 ZNF792Q3KQV3 632 aa24.89■■□□□ 1.58
TRIM39-210ENST00000440271 RIOX2Q8IUF8 465 aa24.89■■□□□ 1.58
TRIM39-210ENST00000440271 RHPN1Q8TCX5 695 aa24.89■■□□□ 1.58
TRIM39-210ENST00000440271 DNAJC2Q99543 621 aaKnown RBP24.89■■□□□ 1.58
TRIM39-210ENST00000440271 DIS3Q9Y2L1 958 aaKnown RBP24.89■■□□□ 1.58
TRIM39-210ENST00000440271 A0A1W2PQ45 241 aaPredicted RBP24.88■■□□□ 1.57
TRIM39-210ENST00000440271 A0A1W2PQY0 241 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 PRKAB2O43741 272 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 PQBP1O60828 265 aaKnown RBP24.88■■□□□ 1.57
TRIM39-210ENST00000440271 KCTD2Q14681 263 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 HSP90AB4PQ58FF6 505 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.88■■□□□ 1.57
TRIM39-210ENST00000440271 CCDC17Q96LX7 622 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 PRDM6Q9NQX0 595 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 TMEM39AQ9NV64 488 aa24.88■■□□□ 1.57
TRIM39-210ENST00000440271 ZNFX1Q9P2E3 1918 aaKnown RBP24.88■■□□□ 1.57
TRIM39-210ENST00000440271 ZNF865P0CJ78 1059 aaPredicted RBP24.87■■□□□ 1.57
TRIM39-210ENST00000440271 STAT3P40763 770 aa24.87■■□□□ 1.57
TRIM39-210ENST00000440271 FPGSQ05932 587 aa24.87■■□□□ 1.57
TRIM39-210ENST00000440271 ATP8A2Q9NTI2 1148 aa24.87■■□□□ 1.57
TRIM39-210ENST00000440271 FBXO28Q9NVF7 368 aa24.87■■□□□ 1.57
TRIM39-210ENST00000440271 SMIM22K7EJ46 135 aa24.86■■□□□ 1.57
TRIM39-210ENST00000440271 VWA5AO00534 786 aa24.86■■□□□ 1.57
TRIM39-210ENST00000440271 EEF2P13639 858 aaKnown RBP24.86■■□□□ 1.57
TRIM39-210ENST00000440271 AKR1A1P14550 325 aa24.86■■□□□ 1.57
TRIM39-210ENST00000440271 CDK8P49336 464 aa24.86■■□□□ 1.57
TRIM39-210ENST00000440271 SYMPKQ92797 1274 aaKnown RBP24.86■■□□□ 1.57
TRIM39-210ENST00000440271 SPTBN5Q9NRC6 3674 aaKnown RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 CYP2D7A0A087X1C5 515 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 FAAP100Q0VG06 881 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 GRIN2CQ14957 1233 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 SLFNL1Q499Z3 407 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 C12orf60Q5U649 245 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 CLASRPQ8N2M8 674 aaKnown RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 LENG1Q96BZ8 264 aaPredicted RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 TOX2Q96NM4 488 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 TSEN34Q9BSV6 310 aaKnown RBP24.85■■□□□ 1.57
TRIM39-210ENST00000440271 CDH23Q9H251 3354 aa24.85■■□□□ 1.57
TRIM39-210ENST00000440271 ROBO3Q96MS0 1386 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 ADAMTS4O75173 837 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 MBD4O95243 580 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 ANKRD33Q7Z3H0 272 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 KANSL2Q9H9L4 492 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 ZNF214Q9UL59 606 aaPredicted RBP24.84■■□□□ 1.57
TRIM39-210ENST00000440271 PPP1R9AQ9ULJ8 1098 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 CNPY2Q9Y2B0 182 aa24.84■■□□□ 1.57
TRIM39-210ENST00000440271 TTC28Q96AY4 2481 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 USP17L12C9JPN9 530 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 USP17L21D6R901 530 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 ADD2P35612 726 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 ACLYP53396 1101 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 C16orf86Q6ZW13 317 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 STARD7Q9NQZ5 370 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 PARP14Q460N5 1801 aa24.83■■□□□ 1.57
TRIM39-210ENST00000440271 DCDC2CA8MYV0 355 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 APBB1O00213 710 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 IFIT2P09913 472 aaKnown RBP24.82■■□□□ 1.56
TRIM39-210ENST00000440271 DNAJB2P25686 324 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 COPB2P35606 906 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 AMOTL1Q8IY63 956 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 REPS2Q8NFH8 660 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 GOPCQ9HD26 462 aa24.82■■□□□ 1.56
TRIM39-210ENST00000440271 FAM83BQ5T0W9 1011 aa24.81■■□□□ 1.56
TRIM39-210ENST00000440271 NUP133Q8WUM0 1156 aa24.81■■□□□ 1.56
TRIM39-210ENST00000440271 KIF1BPQ96EK5 621 aa24.81■■□□□ 1.56
TRIM39-210ENST00000440271 PAG1Q9NWQ8 432 aa24.81■■□□□ 1.56
TRIM39-210ENST00000440271 COL11A1P12107 1806 aaPredicted RBP24.81■■□□□ 1.56
TRIM39-210ENST00000440271 MYH8P13535 1937 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 RAD21O60216 631 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 TIMP1P01033 207 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 MSL3Q8N5Y2 521 aaKnown RBP24.8■■□□□ 1.56
TRIM39-210ENST00000440271 USP38Q8NB14 1042 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 KLHDC9Q8NEP7 349 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 BCL11AQ9H165 835 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 ZNF576Q9H609 170 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 FAM184BQ9ULE4 1060 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 SYNRGQ9UMZ2 1314 aa24.8■■□□□ 1.56
TRIM39-210ENST00000440271 MOXD2PA6NHM9 499 aa24.79■■□□□ 1.56
TRIM39-210ENST00000440271 SNAI1O95863 264 aaPredicted RBP24.79■■□□□ 1.56
TRIM39-210ENST00000440271 KCNA10Q16322 511 aa24.79■■□□□ 1.56
TRIM39-210ENST00000440271 CCSAPQ6IQ19 270 aaPredicted RBP24.79■■□□□ 1.56
TRIM39-210ENST00000440271 BOLA2Q9H3K6 86 aa24.79■■□□□ 1.56
TRIM39-210ENST00000440271 PLXNA1Q9UIW2 1896 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms