RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 PPP4R3BQ5MIZ7 849 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 PHF20Q9BVI0 1012 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 NR5A1Q13285 461 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 CAVIN1Q6NZI2 390 aaKnown RBP13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 MKL1Q969V6 931 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 DEFB129Q9H1M3 183 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 GGA3Q9NZ52 723 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 CFAP45Q9UL16 551 aa13.23□□□□□ -0.29
SMPD4P2-201ENST00000440167 PHIPQ8WWQ0 1821 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 NBPF12Q5TAG4 269 aaPredicted RBP13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 CCDC84Q86UT8 332 aaPredicted RBP13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 PIGSQ96S52 555 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 ELP1O95163 1332 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
SMPD4P2-201ENST00000440167 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 ADAMTS3O15072 1205 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 MBD3O95983 291 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 KRT2P35908 639 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 SLC16A2P36021 539 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 CAP2P40123 477 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 ECE1P42892 770 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 UBE2HP62256 183 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 MAP3K10Q02779 954 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 NPY5RQ15761 445 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 ACER1Q8TDN7 264 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 RIOX1Q9H6W3 641 aa13.21□□□□□ -0.29
SMPD4P2-201ENST00000440167 SLC1A4P43007 532 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 NLRP5P59047 1200 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 ATL3Q6DD88 541 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 DCAF4Q8WV16 495 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 RRP36Q96EU6 259 aaKnown RBP13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 PGBD1Q96JS3 809 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 FZD1Q9UP38 647 aa13.21□□□□□ -0.3
SMPD4P2-201ENST00000440167 SCN4AP35499 1836 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 F5H6K3 240 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 STXBP3O00186 592 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 NDUFB10O96000 172 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 SMARCA1P28370 1054 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 KLRC3Q07444 240 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 STK38Q15208 465 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
SMPD4P2-201ENST00000440167 SSC5DA1L4H1 1573 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
SMPD4P2-201ENST00000440167 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
SMPD4P2-201ENST00000440167 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
SMPD4P2-201ENST00000440167 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
SMPD4P2-201ENST00000440167 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
SMPD4P2-201ENST00000440167 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
SMPD4P2-201ENST00000440167 INPP5BP32019 993 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms