RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ZMYM1Q5SVZ6 1142 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 OSBPL3Q9H4L5 887 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 KANSL2Q9H9L4 492 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 PFASO15067 1338 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 SZT2Q5T011 3432 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 COL6A1P12109 1028 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 EEF2P13639 858 aaKnown RBP19.16■□□□□ 0.66
ITGB1-207ENST00000439974 ADORA2AP29274 412 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 SBK1Q52WX2 424 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 ATG4CQ96DT6 458 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 FAM227BQ96M60 508 aa19.16■□□□□ 0.66
ITGB1-207ENST00000439974 GSG1L2A8MUP6 293 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 MSCO60682 206 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 GSPT1P15170 499 aaKnown RBP19.15■□□□□ 0.66
ITGB1-207ENST00000439974 PLS1Q14651 629 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 CCDC136Q96JN2 1154 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 MROH8Q9H579 483 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 GOPCQ9HD26 462 aa19.15■□□□□ 0.66
ITGB1-207ENST00000439974 DDX20Q9UHI6 824 aaKnown RBP19.15■□□□□ 0.66
ITGB1-207ENST00000439974 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
ITGB1-207ENST00000439974 GREB1LQ9C091 1923 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-207ENST00000439974 A0A0D9SFI3 127 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 IGHA2P01877 340 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 CNGA1P29973 690 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 CYP2C19P33261 490 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 NMIQ13287 307 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-207ENST00000439974 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
ITGB1-207ENST00000439974 OLFML2BQ68BL8 750 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-207ENST00000439974 NCAPG2Q86XI2 1143 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-207ENST00000439974 SLC5A4Q9NY91 659 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 ROBO3Q96MS0 1386 aa19.14■□□□□ 0.65
ITGB1-207ENST00000439974 APPP05067 770 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 GNAT2P19087 354 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 TTC22Q5TAA0 569 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 CENPQQ7L2Z9 268 aaPredicted RBP19.13■□□□□ 0.65
ITGB1-207ENST00000439974 ABRAQ8N0Z2 381 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 GDF15Q99988 308 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
ITGB1-207ENST00000439974 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
ITGB1-207ENST00000439974 LAMA3Q16787 3333 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 COL11A1P12107 1806 aaPredicted RBP19.12■□□□□ 0.65
ITGB1-207ENST00000439974 MINDY4BA8MYZ0 360 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 RAD21O60216 631 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 COBLO75128 1261 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 SLC25A27O95847 323 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 CYBAP13498 195 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 RASA1P20936 1047 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 TMEM132BQ14DG7 1078 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 ADAMTS5Q9UNA0 930 aa19.12■□□□□ 0.65
ITGB1-207ENST00000439974 FCER1AP12319 257 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 SYN1P17600 705 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 SDSP20132 328 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 BMP8BP34820 402 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 TDO2P48775 406 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 FAM83BQ5T0W9 1011 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 VPS53Q5VIR6 699 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 TRPV1Q8NER1 839 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 FBXO28Q9NVF7 368 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 PPP1R9AQ9ULJ8 1098 aa19.11■□□□□ 0.65
ITGB1-207ENST00000439974 ZNFX1Q9P2E3 1918 aaKnown RBP19.1■□□□□ 0.65
ITGB1-207ENST00000439974 LRRC26Q2I0M4 334 aa19.1■□□□□ 0.65
ITGB1-207ENST00000439974 ZNF589Q86UQ0 364 aaPredicted RBP19.1■□□□□ 0.65
ITGB1-207ENST00000439974 ZNF287Q9HBT7 754 aa19.1■□□□□ 0.65
ITGB1-207ENST00000439974 NYAP2Q9P242 653 aa19.1■□□□□ 0.65
ITGB1-207ENST00000439974 PATL2C9JE40 543 aaKnown RBP19.09■□□□□ 0.65
ITGB1-207ENST00000439974 DNM1LO00429 736 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 VWA5AO00534 786 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 FOXP2O15409 715 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 RIOX2Q8IUF8 465 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 IFNL3Q8IZI9 196 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 MAML3Q96JK9 1138 aa19.09■□□□□ 0.65
ITGB1-207ENST00000439974 SENP6Q9GZR1 1112 aaPredicted RBP19.09■□□□□ 0.65
ITGB1-207ENST00000439974 SEPT4O43236 478 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 COPB2P35606 906 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 STAT3P40763 770 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 MAGEA10P43363 369 aaPredicted RBP19.08■□□□□ 0.64
ITGB1-207ENST00000439974 MCMDC2Q4G0Z9 681 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
ITGB1-207ENST00000439974 ZNF444Q8N0Y2 327 aaPredicted RBP19.08■□□□□ 0.64
ITGB1-207ENST00000439974 MMP19Q99542 508 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 NACAP1Q9BZK3 213 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 HELLSQ9NRZ9 838 aa19.08■□□□□ 0.64
ITGB1-207ENST00000439974 ZNF214Q9UL59 606 aaPredicted RBP19.08■□□□□ 0.64
ITGB1-207ENST00000439974 F5H6K3 240 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 KLRC3Q07444 240 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 KCTD2Q14681 263 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 REPS2Q8NFH8 660 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 SLF1Q9BQI6 1058 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 DIAPH3Q9NSV4 1193 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 MYH4Q9Y623 1939 aa19.07■□□□□ 0.64
ITGB1-207ENST00000439974 IGKV6D-41A0A0C4DH26 115 aa19.06■□□□□ 0.64
ITGB1-207ENST00000439974 SOX1O00570 391 aaPredicted RBP19.06■□□□□ 0.64
ITGB1-207ENST00000439974 PRDM1O75626 825 aa19.06■□□□□ 0.64
ITGB1-207ENST00000439974 NDUFB10O96000 172 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms