RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 MKL1Q969V6 931 aa28.45■■■□□ 2.14
CPNE1-217ENST00000439669 SPATC1LQ9H0A9 340 aa28.45■■■□□ 2.14
CPNE1-217ENST00000439669 SYNPO2Q9UMS6 1093 aa28.45■■■□□ 2.14
CPNE1-217ENST00000439669 PLXNB2O15031 1838 aa28.44■■■□□ 2.14
CPNE1-217ENST00000439669 CENPQQ7L2Z9 268 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-217ENST00000439669 MOV10L1Q9BXT6 1211 aaKnown RBP28.44■■■□□ 2.14
CPNE1-217ENST00000439669 STX8Q9UNK0 236 aa28.44■■■□□ 2.14
CPNE1-217ENST00000439669 IVNS1ABPQ9Y6Y0 642 aa28.44■■■□□ 2.14
CPNE1-217ENST00000439669 FGRP09769 529 aa28.43■■■□□ 2.14
CPNE1-217ENST00000439669 RNF208Q9H0X6 261 aa28.43■■■□□ 2.14
CPNE1-217ENST00000439669 PPP1R9AQ9ULJ8 1098 aa28.43■■■□□ 2.14
CPNE1-217ENST00000439669 PARP14Q460N5 1801 aa28.43■■■□□ 2.14
CPNE1-217ENST00000439669 NMT2O60551 498 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 HMGCRP04035 888 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 RGS2P41220 211 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 MORN1Q5T089 497 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 MFSD6Q6ZSS7 791 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 TBC1D10CQ8IV04 446 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 GMCL1P1Q8NEA9 526 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 DSCC1Q9BVC3 393 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 UNC93B1Q9H1C4 597 aa28.42■■■□□ 2.14
CPNE1-217ENST00000439669 ISY1Q9ULR0 285 aaKnown RBP28.42■■■□□ 2.14
CPNE1-217ENST00000439669 ZNF213O14771 459 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 AKNAD1Q5T1N1 836 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 SLFN13Q68D06 897 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 STAG1Q8WVM7 1258 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 RUFY2Q8WXA3 655 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 SLF1Q9BQI6 1058 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 NBPF3Q9H094 633 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 IL25Q9H293 177 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 RNF41Q9H4P4 317 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-217ENST00000439669 IL17RBQ9NRM6 502 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 RAD50Q92878 1312 aa28.41■■■□□ 2.14
CPNE1-217ENST00000439669 PCP11498 1178 aaKnown RBP28.4■■■□□ 2.14
CPNE1-217ENST00000439669 XRCC5P13010 732 aaKnown RBP28.4■■■□□ 2.14
CPNE1-217ENST00000439669 ERCC3P19447 782 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 PTPREP23469 700 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 MAP2K5Q13163 448 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 SHCBP1Q8NEM2 672 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 TRIB2Q92519 343 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 APBA2Q99767 749 aa28.4■■■□□ 2.14
CPNE1-217ENST00000439669 SLC15A5A6NIM6 579 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 VWA5AO00534 786 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 ZKSCAN1P17029 563 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-217ENST00000439669 CHMLP26374 656 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 TMEM132BQ14DG7 1078 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 NCAPG2Q86XI2 1143 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 USP6NLQ92738 828 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 ADAMTS5Q9UNA0 930 aa28.39■■■□□ 2.14
CPNE1-217ENST00000439669 GJB1P08034 283 aa28.38■■■□□ 2.13
CPNE1-217ENST00000439669 CHMP4CQ96CF2 233 aa28.38■■■□□ 2.13
CPNE1-217ENST00000439669 CTNNA3Q9UI47 895 aa28.38■■■□□ 2.13
CPNE1-217ENST00000439669 LAMA4Q16363 1823 aa28.38■■■□□ 2.13
CPNE1-217ENST00000439669 CENPFP49454 3210 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 BMP3P12645 472 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 TRIM32Q13049 653 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 GRB14Q14449 540 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 IMMTQ16891 758 aaKnown RBP28.37■■■□□ 2.13
CPNE1-217ENST00000439669 TRMT44Q8IYL2 757 aaKnown RBP28.37■■■□□ 2.13
CPNE1-217ENST00000439669 NKX2-3Q8TAU0 364 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 KIFC2Q96AC6 838 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 MROH8Q9H579 483 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 FEM1BQ9UK73 627 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 MTMR7Q9Y216 660 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 NEDD4P46934 1319 aa28.37■■■□□ 2.13
CPNE1-217ENST00000439669 COL11A1P12107 1806 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-217ENST00000439669 NEFLP07196 543 aa28.36■■■□□ 2.13
CPNE1-217ENST00000439669 SLC1A4P43007 532 aa28.36■■■□□ 2.13
CPNE1-217ENST00000439669 PRPF38AQ8NAV1 312 aaKnown RBP28.36■■■□□ 2.13
CPNE1-217ENST00000439669 CTDP1Q9Y5B0 961 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-217ENST00000439669 SLC25A27O95847 323 aa28.35■■■□□ 2.13
CPNE1-217ENST00000439669 CCL14Q16627 93 aa28.35■■■□□ 2.13
CPNE1-217ENST00000439669 ESR2Q92731 530 aa28.35■■■□□ 2.13
CPNE1-217ENST00000439669 GMCL1Q96IK5 515 aa28.35■■■□□ 2.13
CPNE1-217ENST00000439669 MCCP23508 829 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 STAT3P40763 770 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 GJA8P48165 433 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 IKQ13123 557 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-217ENST00000439669 SKAP1Q86WV1 359 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 RIOX2Q8IUF8 465 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 REPS2Q8NFH8 660 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 U2AF1L4Q8WU68 220 aaKnown RBP28.34■■■□□ 2.13
CPNE1-217ENST00000439669 SHISA4Q96DD7 197 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 CCDC136Q96JN2 1154 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.34■■■□□ 2.136e-9■□□□□ 10.4
CPNE1-217ENST00000439669 TCP11L1Q9NUJ3 509 aa28.34■■■□□ 2.13
CPNE1-217ENST00000439669 ZNF214Q9UL59 606 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-217ENST00000439669 TMEM232C9JQI7 657 aa28.33■■■□□ 2.13
CPNE1-217ENST00000439669 STRNO43815 780 aa28.33■■■□□ 2.13
CPNE1-217ENST00000439669 PRKAR2AP13861 404 aaKnown RBP28.33■■■□□ 2.13
CPNE1-217ENST00000439669 ADORA2AP29274 412 aa28.33■■■□□ 2.13
CPNE1-217ENST00000439669 DPP9Q86TI2 863 aa28.33■■■□□ 2.13
CPNE1-217ENST00000439669 DEFB118Q96PH6 123 aa28.33■■■□□ 2.13
CPNE1-217ENST00000439669 HMX1Q9NP08 348 aaPredicted RBP28.33■■■□□ 2.13
CPNE1-217ENST00000439669 ZBED4O75132 1171 aa28.32■■■□□ 2.12
CPNE1-217ENST00000439669 TOP1P11387 765 aaKnown RBP28.32■■■□□ 2.12
CPNE1-217ENST00000439669 NOVP48745 357 aa28.32■■■□□ 2.12
CPNE1-217ENST00000439669 STAT2P52630 851 aa28.32■■■□□ 2.12
CPNE1-217ENST00000439669 TEX13BQ9BXU2 312 aa28.32■■■□□ 2.12
CPNE1-217ENST00000439669 PAK6Q9NQU5 681 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms