RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 FLRT1Q9NZU1 646 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 CLIP2Q9UDT6 1046 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
PRAME-209ENST00000439106 ERCC3P19447 782 aa16.48■□□□□ 0.23
PRAME-209ENST00000439106 PTPREP23469 700 aa16.48■□□□□ 0.23
PRAME-209ENST00000439106 UBE2Q1Q7Z7E8 422 aa16.48■□□□□ 0.23
PRAME-209ENST00000439106 NPLOC4Q8TAT6 608 aa16.48■□□□□ 0.23
PRAME-209ENST00000439106 DIS3LQ8TF46 1054 aaKnown RBP16.48■□□□□ 0.23
PRAME-209ENST00000439106 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
PRAME-209ENST00000439106 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 NDUFB10O96000 172 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
PRAME-209ENST00000439106 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
PRAME-209ENST00000439106 CCND3P30281 292 aaPredicted RBP16.47■□□□□ 0.23
PRAME-209ENST00000439106 CACNB2Q08289 660 aaPredicted RBP16.47■□□□□ 0.23
PRAME-209ENST00000439106 GRB14Q14449 540 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
PRAME-209ENST00000439106 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 IVNS1ABPQ9Y6Y0 642 aa16.47■□□□□ 0.23
PRAME-209ENST00000439106 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 F5H6K3 240 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 TFAP4Q01664 338 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 PDE4BQ07343 736 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 KLRC3Q07444 240 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 RASGRP2Q7LDG7 609 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 NCAPG2Q86XI2 1143 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 MTMR4Q9NYA4 1195 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.231e-7■■□□□ 11.9
PRAME-209ENST00000439106 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
PRAME-209ENST00000439106 NMT2O60551 498 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
PRAME-209ENST00000439106 PDE4AP27815 886 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 ADORA2AP29274 412 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 NEDD1Q8NHV4 660 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 CRISPLD2Q9H0B8 497 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 OSBPL3Q9H4L5 887 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 ZNF287Q9HBT7 754 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
PRAME-209ENST00000439106 VWA5AO00534 786 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 COBLO75128 1261 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
PRAME-209ENST00000439106 SDSP20132 328 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 CYP2C19P33261 490 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 HAND2P61296 217 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 REPS2Q8NFH8 660 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 DPF3Q92784 378 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
PRAME-209ENST00000439106 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
PRAME-209ENST00000439106 LCTP09848 1927 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 MYH6P13533 1939 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 TSPY2A6NKD2 308 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 RANBP6O60518 1105 aaKnown RBP16.43■□□□□ 0.22
PRAME-209ENST00000439106 TTLL1O95922 423 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 FGAP02671 866 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 SLF1Q9BQI6 1058 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
PRAME-209ENST00000439106 ZNF214Q9UL59 606 aaPredicted RBP16.43■□□□□ 0.22
PRAME-209ENST00000439106 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
PRAME-209ENST00000439106 H0YGN5 161 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 HOXC6P09630 235 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
PRAME-209ENST00000439106 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
PRAME-209ENST00000439106 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
PRAME-209ENST00000439106 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
PRAME-209ENST00000439106 MKL1Q969V6 931 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 IL17RBQ9NRM6 502 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
PRAME-209ENST00000439106 PGK2P07205 417 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 STAT3P40763 770 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 ALX1Q15699 326 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 IL25Q9H293 177 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 MROH8Q9H579 483 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
PRAME-209ENST00000439106 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
PRAME-209ENST00000439106 CNGA1P29973 690 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 SNRNP48Q6IEG0 339 aaKnown RBP16.4■□□□□ 0.22
PRAME-209ENST00000439106 RIOX2Q8IUF8 465 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 CPXCR1Q8N123 301 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 MMP19Q99542 508 aa16.4■□□□□ 0.22
PRAME-209ENST00000439106 HTATIP2Q9BUP3 242 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms