RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 SMARCA5O60264 1052 aaPredicted RBP11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 SYN1P17600 705 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 PTPREP23469 700 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 CNGA1P29973 690 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 ADD2P35612 726 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 COG2Q14746 738 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 TMEM179Q6ZVK1 233 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 DDRGK1Q96HY6 314 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 HAUS7Q99871 368 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 PRO3102Q9H379 93 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 PLXNB2O15031 1838 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 AKR1B1P15121 316 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 NUCB1Q02818 461 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 PLS1Q14651 629 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 DPP9Q86TI2 863 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 CLEC10AQ8IUN9 316 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 SPICE1Q8N0Z3 855 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 ATP8A2Q9NTI2 1148 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 SLC4A4Q9Y6R1 1079 aa11.03□□□□□ -0.64
AC011228.1-201ENST00000439027 A0A1W2PPC1 479 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 USP17L21D6R901 530 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 SNPHO15079 494 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 FLOT1O75955 427 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 CHGBP05060 677 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 CYP2C19P33261 490 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 CDK8P49336 464 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 ICA1Q05084 483 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 ZSCAN25Q6NSZ9 544 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 CHD1LQ86WJ1 897 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.65
AC011228.1-201ENST00000439027 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 SMIM22K7EJ46 135 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 RAD21O60216 631 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 ERCC3P19447 782 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 ADORA2AP29274 412 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 MAGEA10P43363 369 aaPredicted RBP11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 GRB14Q14449 540 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 UBE3CQ15386 1083 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 C12orf60Q5U649 245 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 NCAPG2Q86XI2 1143 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 SPATC1LQ9H0A9 340 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 PFASO15067 1338 aa11.01□□□□□ -0.65
AC011228.1-201ENST00000439027 ALPK3Q96L96 1907 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 STRNO43815 780 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 HOXC6P09630 235 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 LRRC26Q2I0M4 334 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 SIAH1Q8IUQ4 282 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 STK11IPQ8N1F8 1099 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 MB21D1Q8N884 522 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 LPAR1Q92633 364 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 ATG4CQ96DT6 458 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 LRCH3Q96II8 777 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 GDF15Q99988 308 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 UBE2OQ9C0C9 1292 aaKnown RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 SENP6Q9GZR1 1112 aaPredicted RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 VCPKMTQ9H867 229 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 ECHDC1Q9NTX5 307 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 SLC5A4Q9NY91 659 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 TMX2Q9Y320 296 aa11□□□□□ -0.65
AC011228.1-201ENST00000439027 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
AC011228.1-201ENST00000439027 ST18O60284 1047 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 MSCO60682 206 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 COL6A1P12109 1028 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 EEF2P13639 858 aaKnown RBP10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 PDE4AP27815 886 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 BMP8BP34820 402 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 C16orf86Q6ZW13 317 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 SHCBP1Q8NEM2 672 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 GPATCH3Q96I76 525 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 MROH8Q9H579 483 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 KANSL2Q9H9L4 492 aa10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
AC011228.1-201ENST00000439027 CUL9Q8IWT3 2517 aa10.98□□□□□ -0.65
AC011228.1-201ENST00000439027 MINDY4BA8MYZ0 360 aa10.98□□□□□ -0.65
AC011228.1-201ENST00000439027 WDR46O15213 610 aaKnown RBP10.98□□□□□ -0.65
AC011228.1-201ENST00000439027 COBLO75128 1261 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms