RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ERVK-24P63145 666 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 CERKLQ49MI3 558 aaPredicted RBP9.39□□□□□ -0.91
VPS50-204ENST00000438395 SLC9C2Q5TAH2 1124 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
VPS50-204ENST00000438395 KIF1BPQ96EK5 621 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 APBA2Q99767 749 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
VPS50-204ENST00000438395 RANBP2P49792 3224 aaKnown RBP9.39□□□□□ -0.91
VPS50-204ENST00000438395 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 GOLIM4O00461 696 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 XRCC5P13010 732 aaKnown RBP9.38□□□□□ -0.91
VPS50-204ENST00000438395 PDE6AP16499 860 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 JAG1P78504 1218 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
VPS50-204ENST00000438395 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
VPS50-204ENST00000438395 MFSD14CQ5VZR4 134 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 GPR142Q7Z601 462 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 C7orf61Q8IZ16 206 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 TRIB2Q92519 343 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.38□□□□□ -0.91
VPS50-204ENST00000438395 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 MCM9Q9NXL9 1143 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 GJD2Q9UKL4 321 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 RABGAP1Q9Y3P9 1069 aa9.38□□□□□ -0.91
VPS50-204ENST00000438395 PTPRFP10586 1907 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 A0A1W2PPC1 479 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 VCAM1P19320 739 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 RPAP2Q8IXW5 612 aaPredicted RBP9.37□□□□□ -0.91
VPS50-204ENST00000438395 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
VPS50-204ENST00000438395 C12orf42Q96LP6 360 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 PORCNQ9H237 461 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 C11orf49Q9H6J7 331 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 ANTXR1Q9H6X2 564 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 SH2D4AQ9H788 454 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 RBPJLQ9UBG7 517 aa9.37□□□□□ -0.91
VPS50-204ENST00000438395 ZNF532Q9HCE3 1301 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 PHIPQ8WWQ0 1821 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 TRIM32Q13049 653 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
VPS50-204ENST00000438395 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
VPS50-204ENST00000438395 ZMYND8Q9ULU4 1186 aaPredicted RBP9.36□□□□□ -0.91
VPS50-204ENST00000438395 MGAMO43451 1857 aa9.36□□□□□ -0.91
VPS50-204ENST00000438395 SLC15A5A6NIM6 579 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 PEX10O60683 326 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 CNGA1P29973 690 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 SHMT1P34896 483 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 SEPT2Q15019 361 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 MAP3K21Q5TCX8 1036 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 TMEM179Q6ZVK1 233 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS50-204ENST00000438395 EDC3Q96F86 508 aaKnown RBP9.35□□□□□ -0.91
VPS50-204ENST00000438395 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 HOXC10Q9NYD6 342 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 STAP2Q9UGK3 403 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 OGDHLQ9ULD0 1010 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 COG6Q9Y2V7 657 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 ATAD5Q96QE3 1844 aa9.35□□□□□ -0.91
VPS50-204ENST00000438395 RAD21O60216 631 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 MSCO60682 206 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 MBD4O95243 580 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 PLCD1P51178 756 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 ICA1Q05084 483 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
VPS50-204ENST00000438395 PLS1Q14651 629 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 CCL14Q16627 93 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 MORN1Q5T089 497 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 LCORLQ8N3X6 602 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 MB21D1Q8N884 522 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 LPAR1Q92633 364 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 GPATCH3Q96I76 525 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 SLC5A4Q9NY91 659 aa9.34□□□□□ -0.91
VPS50-204ENST00000438395 FLOT1O75955 427 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 SYN1P17600 705 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 CCND3P30281 292 aaPredicted RBP9.33□□□□□ -0.92
VPS50-204ENST00000438395 KCNC4Q03721 635 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 COG2Q14746 738 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 Q3C1V9 767 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 USP6NLQ92738 828 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 CCDC17Q96LX7 622 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms