RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
HERPUD2-206ENST00000438224 FRMPD3Q5JV73 1810 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 CNMDO75829 334 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 GNRH1P01148 92 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 GCLCP48506 637 aaPredicted RBP10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 TDO2P48775 406 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 FCGRTP55899 365 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 ICA1Q05084 483 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 NMIQ13287 307 aaPredicted RBP10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 Q3C1V9 767 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 CATSPERGQ6ZRH7 1159 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
HERPUD2-206ENST00000438224 PLXNA1Q9UIW2 1896 aa10.21□□□□□ -0.78
HERPUD2-206ENST00000438224 IGKV6D-41A0A0C4DH26 115 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 PRDM1O75626 825 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 MYCP01106 439 aaPredicted RBP10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 EEF2P13639 858 aaKnown RBP10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 GNAT2P19087 354 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 FLT3LGP49771 235 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 ARHGEF6Q15052 776 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 MTFR1Q15390 333 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 SLC9C1Q4G0N8 1177 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 RETREG2Q8NC44 543 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 ALPK3Q96L96 1907 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 CCDC17Q96LX7 622 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 PAGR1Q9BTK6 254 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 REPIN1Q9BWE0 567 aaKnown RBP10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 PORCNQ9H237 461 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 RPAP3Q9H6T3 665 aaPredicted RBP10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 INCENPQ9NQS7 918 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 TMX2Q9Y320 296 aa10.2□□□□□ -0.78
HERPUD2-206ENST00000438224 MCM3APO60318 1980 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 TNPO2O14787 897 aaKnown RBP10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 APPP05067 770 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 GSPT1P15170 499 aaKnown RBP10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 ELNP15502 786 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 GRK4P32298 578 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP14P54578 494 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 PRMT2P55345 433 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 ERVK-24P63145 666 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 PPARAQ07869 468 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 LRRFIP1Q32MZ4 808 aaKnown RBP10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 SPICE1Q8N0Z3 855 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 RGS22Q8NE09 1264 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 NKX2-3Q8TAU0 364 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 RILPL2Q969X0 211 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 IL25Q9H293 177 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 HELLSQ9NRZ9 838 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 BTBD7Q9P203 1132 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 GJD2Q9UKL4 321 aa10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.19□□□□□ -0.78
HERPUD2-206ENST00000438224 PLIN4Q96Q06 1357 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 EN2P19622 333 aaPredicted RBP10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 SDSP20132 328 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 CLCN1P35523 988 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 MLLT1Q03111 559 aaPredicted RBP10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 LBX2Q6XYB7 198 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 RAET1EQ8TD07 263 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 SHISA4Q96DD7 197 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 NAPBQ9H115 298 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 FBXO28Q9NVF7 368 aa10.18□□□□□ -0.78
HERPUD2-206ENST00000438224 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 ADCY3O60266 1144 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 HSPD1P10809 573 aaKnown RBP10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 HOXD10P28358 340 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 TRIM32Q13049 653 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 PTGDRQ13258 359 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 IRF5Q13568 498 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 ALX1Q15699 326 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 SKAP1Q86WV1 359 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 GPRC5AQ8NFJ5 357 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 CEP95Q96GE4 821 aa10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 NUP88Q99567 741 aaPredicted RBP10.17□□□□□ -0.78
HERPUD2-206ENST00000438224 TANGO6Q9C0B7 1094 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms