RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 SNHG28P0DPA3 235 aa21.31■■□□□ 1
IRF1-203ENST00000437654 CHST3Q7LGC8 479 aa21.31■■□□□ 1
IRF1-203ENST00000437654 CHURC1Q8WUH1 139 aa21.31■■□□□ 1
IRF1-203ENST00000437654 MAP3K14Q99558 947 aa21.31■■□□□ 1
IRF1-203ENST00000437654 CYP46A1Q9Y6A2 500 aa21.31■■□□□ 1
IRF1-203ENST00000437654 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
IRF1-203ENST00000437654 RAD21O60216 631 aa21.3■■□□□ 1
IRF1-203ENST00000437654 FDX1P10109 184 aa21.3■■□□□ 1
IRF1-203ENST00000437654 CASTP20810 708 aaKnown RBP21.3■■□□□ 1
IRF1-203ENST00000437654 RPS6KB1P23443 525 aa21.3■■□□□ 1
IRF1-203ENST00000437654 RBM25P49756 843 aaKnown RBP21.3■■□□□ 1
IRF1-203ENST00000437654 CRHR2Q13324 411 aa21.3■■□□□ 1
IRF1-203ENST00000437654 GPATCH4Q5T3I0 446 aaKnown RBP21.3■■□□□ 1
IRF1-203ENST00000437654 FAM160B2Q86V87 743 aa21.3■■□□□ 1
IRF1-203ENST00000437654 SGMS1Q86VZ5 419 aa21.3■■□□□ 1
IRF1-203ENST00000437654 SMCR8Q8TEV9 937 aaPredicted RBP21.3■■□□□ 1
IRF1-203ENST00000437654 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
IRF1-203ENST00000437654 TANGO6Q9C0B7 1094 aa21.3■■□□□ 1
IRF1-203ENST00000437654 LY9Q9HBG7 655 aa21.3■■□□□ 1
IRF1-203ENST00000437654 PDHBP11177 359 aa21.29■■□□□ 1
IRF1-203ENST00000437654 DSG3P32926 999 aa21.29■■□□□ 1
IRF1-203ENST00000437654 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
IRF1-203ENST00000437654 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
IRF1-203ENST00000437654 MB21D1Q8N884 522 aa21.29■■□□□ 1
IRF1-203ENST00000437654 PRPF38AQ8NAV1 312 aaKnown RBP21.29■■□□□ 1
IRF1-203ENST00000437654 P2RX7Q99572 595 aaKnown RBP21.29■■□□□ 1
IRF1-203ENST00000437654 AGXT2Q9BYV1 514 aa21.29■■□□□ 1
IRF1-203ENST00000437654 ADAMTS5Q9UNA0 930 aa21.29■■□□□ 1
IRF1-203ENST00000437654 CCDC69A6NI79 296 aa21.28■■□□□ 1
IRF1-203ENST00000437654 FLOT1O75955 427 aa21.28■■□□□ 1
IRF1-203ENST00000437654 TBC1D8O95759 1140 aa21.28■■□□□ 1
IRF1-203ENST00000437654 CALM1P0DP23 149 aa21.28■■□□□ 1
IRF1-203ENST00000437654 CALM2P0DP24 149 aa21.28■■□□□ 1
IRF1-203ENST00000437654 CALM3P0DP25 149 aa21.28■■□□□ 1
IRF1-203ENST00000437654 CYP2C8P10632 490 aa21.28■■□□□ 1
IRF1-203ENST00000437654 HERVK_113P62684 666 aa21.28■■□□□ 1
IRF1-203ENST00000437654 C17orf99Q6UX52 265 aa21.28■■□□□ 1
IRF1-203ENST00000437654 ALDH8A1Q9H2A2 487 aaPredicted RBP21.28■■□□□ 1
IRF1-203ENST00000437654 MYH4Q9Y623 1939 aa21.27■■□□□ 1
IRF1-203ENST00000437654 DDAH1O94760 285 aa21.27■■□□□ 1
IRF1-203ENST00000437654 CTCFP49711 727 aaPredicted RBP21.27■■□□□ 1
IRF1-203ENST00000437654 STAT2P52630 851 aa21.27■■□□□ 1
IRF1-203ENST00000437654 RCAN1P53805 252 aa21.27■■□□□ 1
IRF1-203ENST00000437654 FGD1P98174 961 aa21.27■■□□□ 1
IRF1-203ENST00000437654 ASPRV1Q53RT3 343 aa21.27■■□□□ 1
IRF1-203ENST00000437654 BTNL9Q6UXG8 535 aa21.27■■□□□ 1
IRF1-203ENST00000437654 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
IRF1-203ENST00000437654 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
IRF1-203ENST00000437654 PPP1R9AQ9ULJ8 1098 aa21.27■■□□□ 1
IRF1-203ENST00000437654 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
IRF1-203ENST00000437654 ADGRA2Q96PE1 1338 aa21.27■□□□□ 0.99
IRF1-203ENST00000437654 HSPA1AP0DMV8 641 aaKnown RBP21.26■□□□□ 0.99
IRF1-203ENST00000437654 HSPA1BP0DMV9 641 aaKnown RBP21.26■□□□□ 0.99
IRF1-203ENST00000437654 ZNF543Q08ER8 600 aa21.26■□□□□ 0.99
IRF1-203ENST00000437654 TROAPQ12815 778 aa21.26■□□□□ 0.99
IRF1-203ENST00000437654 SLF1Q9BQI6 1058 aa21.26■□□□□ 0.99
IRF1-203ENST00000437654 MORF4L1Q9UBU8 362 aa21.26■□□□□ 0.99
IRF1-203ENST00000437654 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
IRF1-203ENST00000437654 SPDYE16A6NNV3 312 aaPredicted RBP21.25■□□□□ 0.99
IRF1-203ENST00000437654 TMEM232C9JQI7 657 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 GPR25O00155 361 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 PARP1P09874 1014 aaKnown RBP21.25■□□□□ 0.99
IRF1-203ENST00000437654 BCRP11274 1271 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 EVCP57679 992 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
IRF1-203ENST00000437654 PPP2R5BQ15173 497 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 FAM110CQ1W6H9 321 aa21.25■□□□□ 0.99
IRF1-203ENST00000437654 NUP88Q99567 741 aaPredicted RBP21.25■□□□□ 0.99
IRF1-203ENST00000437654 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 KIF5BP33176 963 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 CCDC96Q2M329 555 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 Q6ZUG5 572 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 ZNF654Q8IZM8 581 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 PDRG1Q9NUG6 133 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 RBPJLQ9UBG7 517 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 PNMA2Q9UL42 364 aa21.24■□□□□ 0.99
IRF1-203ENST00000437654 PALM3A6NDB9 673 aaPredicted RBP21.23■□□□□ 0.99
IRF1-203ENST00000437654 GNAQP50148 359 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 SP3Q02447 781 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 GRM4Q14833 912 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 ARHGEF6Q15052 776 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 ANKRD1Q15327 319 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 KCTD1Q719H9 257 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 LZTS2Q9BRK4 669 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 LRRC2Q9BYS8 371 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 SENP2Q9HC62 589 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 CPA4Q9UI42 421 aa21.23■□□□□ 0.99
IRF1-203ENST00000437654 VWA5AO00534 786 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 ATP2A1O14983 1001 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 FOXN1O15353 648 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 FKTNO75072 461 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 ZBED4O75132 1171 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 CPA1P15085 419 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 OAZ1P54368 228 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 CCNA1P78396 465 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
IRF1-203ENST00000437654 TCEANC2Q96MN5 208 aa21.22■□□□□ 0.99
IRF1-203ENST00000437654 GPHNQ9NQX3 736 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms