RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 TEX33O43247 280 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 CCNT1O60563 726 aaKnown RBP13.02□□□□□ -0.33
NEFM-203ENST00000437366 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
NEFM-203ENST00000437366 NPY5RQ15761 445 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 WWC2Q6AWC2 1192 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 VPS16Q9H269 839 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 BMP15O95972 392 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 SBK1Q52WX2 424 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 BAG1Q99933 345 aaPredicted RBP13.02□□□□□ -0.33
NEFM-203ENST00000437366 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
NEFM-203ENST00000437366 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 DGKHQ86XP1 1220 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEFM-203ENST00000437366 CEP95Q96GE4 821 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 PCDHA4Q9UN74 947 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 FAM237AA0A1B0GTK4 181 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 CYTH3O43739 400 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 RASA1P20936 1047 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 ATP2C1P98194 919 aaPredicted RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
NEFM-203ENST00000437366 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
NEFM-203ENST00000437366 FGRP09769 529 aa13□□□□□ -0.33
NEFM-203ENST00000437366 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
NEFM-203ENST00000437366 TCP10Q12799 353 aa13□□□□□ -0.33
NEFM-203ENST00000437366 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
NEFM-203ENST00000437366 SMCO2A6NFE2 343 aa13□□□□□ -0.33
NEFM-203ENST00000437366 N4BP3O15049 544 aa13□□□□□ -0.33
NEFM-203ENST00000437366 MARCH6O60337 910 aa13□□□□□ -0.33
NEFM-203ENST00000437366 ATP2B4P23634 1241 aa13□□□□□ -0.33
NEFM-203ENST00000437366 HSPA1LP34931 641 aa13□□□□□ -0.33
NEFM-203ENST00000437366 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
NEFM-203ENST00000437366 CACNB3P54284 484 aa13□□□□□ -0.33
NEFM-203ENST00000437366 ELF2Q15723 593 aa13□□□□□ -0.33
NEFM-203ENST00000437366 IL17AQ16552 155 aa13□□□□□ -0.33
NEFM-203ENST00000437366 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
NEFM-203ENST00000437366 ZSCAN29Q8IWY8 852 aaPredicted RBP13□□□□□ -0.33
NEFM-203ENST00000437366 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
NEFM-203ENST00000437366 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
NEFM-203ENST00000437366 PIGSQ96S52 555 aa13□□□□□ -0.33
NEFM-203ENST00000437366 RTFDC1Q9BY42 306 aaPredicted RBP13□□□□□ -0.33
NEFM-203ENST00000437366 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
NEFM-203ENST00000437366 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
NEFM-203ENST00000437366 UTRNP46939 3433 aa13□□□□□ -0.33
NEFM-203ENST00000437366 FLT1P17948 1338 aa13□□□□□ -0.33
NEFM-203ENST00000437366 GNAQP50148 359 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 GNG11P61952 73 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 MED15Q96RN5 788 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 TTF2Q9UNY4 1162 aaKnown RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 NID2Q14112 1375 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 ERCC3P19447 782 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 ZBTB9Q96C00 473 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 TAB2Q9NYJ8 693 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 TECP42680 631 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 SARSP49591 514 aaKnown RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 MTF1Q14872 753 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 COA7Q96BR5 231 aa12.99□□□□□ -0.33
NEFM-203ENST00000437366 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
NEFM-203ENST00000437366 DDR1Q08345 913 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 ZSWIM4Q9H7M6 989 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
NEFM-203ENST00000437366 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TRIM49BA6NDI0 452 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TXKP42681 527 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 DPYDQ12882 1025 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 GRM4Q14833 912 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TRIML1Q8N9V2 468 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 NELFBQ8WX92 580 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
NEFM-203ENST00000437366 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
NEFM-203ENST00000437366 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
NEFM-203ENST00000437366 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
NEFM-203ENST00000437366 SLC16A2P36021 539 aa12.97□□□□□ -0.33
NEFM-203ENST00000437366 SPATA1Q5VX52 437 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms