RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SLC15A5A6NIM6 579 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 FGAP02671 866 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 HSPD1P10809 573 aaKnown RBP21.74■■□□□ 1.07
HMGN1-207ENST00000436324 XRCC5P13010 732 aaKnown RBP21.74■■□□□ 1.07
HMGN1-207ENST00000436324 ERCC3P19447 782 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 TICAM2Q86XR7 235 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 POTEDQ86YR6 584 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 APBA2Q99767 749 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
HMGN1-207ENST00000436324 CCDC171Q6TFL3 1326 aa21.74■■□□□ 1.07
HMGN1-207ENST00000436324 TTLL1O95922 423 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
HMGN1-207ENST00000436324 NCAPG2Q86XI2 1143 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 HMX1Q9NP08 348 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-207ENST00000436324 PAK6Q9NQU5 681 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-207ENST00000436324 TOMM22Q9NS69 142 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 DIAPH3Q9NSV4 1193 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 PPP1R9AQ9ULJ8 1098 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 RPTORQ8N122 1335 aa21.73■■□□□ 1.07
HMGN1-207ENST00000436324 TSPY2A6NKD2 308 aa21.72■■□□□ 1.07
HMGN1-207ENST00000436324 RANBP6O60518 1105 aaKnown RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 PRKAR2AP13861 404 aaKnown RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 HAND2P61296 217 aa21.72■■□□□ 1.07
HMGN1-207ENST00000436324 TMEM132BQ14DG7 1078 aa21.72■■□□□ 1.07
HMGN1-207ENST00000436324 RRP12Q5JTH9 1297 aaKnown RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 TRMT44Q8IYL2 757 aaKnown RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 MKL1Q969V6 931 aa21.72■■□□□ 1.07
HMGN1-207ENST00000436324 ANAPC4Q9UJX5 808 aa21.72■■□□□ 1.07
HMGN1-207ENST00000436324 ISY1Q9ULR0 285 aaKnown RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 GREB1LQ9C091 1923 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-207ENST00000436324 GRB14Q14449 540 aa21.71■■□□□ 1.07
HMGN1-207ENST00000436324 PRPF38BQ5VTL8 546 aaKnown RBP21.71■■□□□ 1.07
HMGN1-207ENST00000436324 NPLOC4Q8TAT6 608 aa21.71■■□□□ 1.07
HMGN1-207ENST00000436324 SLF1Q9BQI6 1058 aa21.71■■□□□ 1.07
HMGN1-207ENST00000436324 PLIN4Q96Q06 1357 aa21.71■■□□□ 1.07
HMGN1-207ENST00000436324 VWA5AO00534 786 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 NMT2O60551 498 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 FARP2O94887 1054 aaPredicted RBP21.7■■□□□ 1.06
HMGN1-207ENST00000436324 MFAP1P55081 439 aaKnown RBP21.7■■□□□ 1.06
HMGN1-207ENST00000436324 CACNB2Q08289 660 aaPredicted RBP21.7■■□□□ 1.06
HMGN1-207ENST00000436324 SLFN13Q68D06 897 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 DPP9Q86TI2 863 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 FLRT1Q9NZU1 646 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 ADAMTS5Q9UNA0 930 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 RLFQ13129 1914 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 CENPFP49454 3210 aa21.7■■□□□ 1.06
HMGN1-207ENST00000436324 ADORA2AP29274 412 aa21.69■■□□□ 1.06
HMGN1-207ENST00000436324 MROH8Q9H579 483 aa21.69■■□□□ 1.06
HMGN1-207ENST00000436324 IL17RBQ9NRM6 502 aa21.69■■□□□ 1.06
HMGN1-207ENST00000436324 STX8Q9UNK0 236 aa21.69■■□□□ 1.06
HMGN1-207ENST00000436324 PDE4DIPQ5VU43 2346 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 HIP1O00291 1037 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 CCND3P30281 292 aaPredicted RBP21.68■■□□□ 1.06
HMGN1-207ENST00000436324 STAT3P40763 770 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 SLC4A3P48751 1232 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 MAP3K21Q5TCX8 1036 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 MFSD14CQ5VZR4 134 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 KIFC2Q96AC6 838 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 MTMR7Q9Y216 660 aa21.68■■□□□ 1.06
HMGN1-207ENST00000436324 CTDP1Q9Y5B0 961 aaPredicted RBP21.68■■□□□ 1.06
HMGN1-207ENST00000436324 STRNO43815 780 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 ORC4O43929 436 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 COBLO75128 1261 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 SLC25A27O95847 323 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 GSPT1P15170 499 aaKnown RBP21.67■■□□□ 1.06
HMGN1-207ENST00000436324 TTC22Q5TAA0 569 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 PRPF38AQ8NAV1 312 aaKnown RBP21.67■■□□□ 1.06
HMGN1-207ENST00000436324 GMCL1P1Q8NEA9 526 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 REPS2Q8NFH8 660 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 CRISPLD2Q9H0B8 497 aa21.67■■□□□ 1.06
HMGN1-207ENST00000436324 TNRC18O15417 2968 aaPredicted RBP21.67■■□□□ 1.06
HMGN1-207ENST00000436324 A0A0G2JMZ2 1700 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 HOXC6P09630 235 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 FGRP09769 529 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 BMP3P12645 472 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 CYP2C19P33261 490 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 UBE2Q1Q7Z7E8 422 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 RIOX2Q8IUF8 465 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 CPXCR1Q8N123 301 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 DPF3Q92784 378 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 FEM1BQ9UK73 627 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 SYNPO2Q9UMS6 1093 aa21.66■■□□□ 1.06
HMGN1-207ENST00000436324 ZMYM6O95789 1325 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 TMEM232C9JQI7 657 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 ZBED4O75132 1171 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 FCER1AP12319 257 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 MCCP23508 829 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 PPP4R3BQ5MIZ7 849 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 MMP19Q99542 508 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 NBPF3Q9H094 633 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-207ENST00000436324 MYH4Q9Y623 1939 aa21.65■■□□□ 1.06
HMGN1-207ENST00000436324 CNGA1P29973 690 aa21.64■■□□□ 1.05
HMGN1-207ENST00000436324 SLC1A4P43007 532 aa21.64■■□□□ 1.05
HMGN1-207ENST00000436324 IKQ13123 557 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-207ENST00000436324 AKNAD1Q5T1N1 836 aa21.64■■□□□ 1.05
HMGN1-207ENST00000436324 SNRNP48Q6IEG0 339 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms