RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 FERMT2Q96AC1 680 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 SLC35G1Q2M3R5 365 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 RASGRP2Q7LDG7 609 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 CRNKL1Q9BZJ0 848 aaKnown RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 ADD3Q9UEY8 706 aaKnown RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 MTMR7Q9Y216 660 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 ZSCAN12O43309 604 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CALM1P0DP23 149 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CALM2P0DP24 149 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CALM3P0DP25 149 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CTNND2Q9UQB3 1225 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CCP110O43303 1012 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 NBPF5PQ86XG9 351 aaPredicted RBP11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 TM4SF1P30408 202 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 PBX1P40424 430 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
CLSTN1-203ENST00000435891 TADA3O75528 432 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 TFAP4Q01664 338 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 USP17L3A6NCW0 530 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 USP17L4A6NCW7 530 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 USP17L1Q7RTZ2 530 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 SETDB2Q96T68 719 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 AKR1B15C9JRZ8 316 aaPredicted RBP11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLSTN1-203ENST00000435891 GNPATO15228 680 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 ABL1P00519 1130 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 TUBB4AP04350 444 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 CASP14P31944 242 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 C4orf32Q8N8J7 132 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 LZTFL1Q9NQ48 299 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 MKRN1Q9UHC7 482 aaKnown RBP11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 IRS2Q9Y4H2 1338 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 SEMA3EO15041 775 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 GYPCP04921 128 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 UBXN4Q92575 508 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 GDAQ9Y2T3 454 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 FHOD1Q9Y613 1164 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 RRAGBQ5VZM2 374 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
CLSTN1-203ENST00000435891 CYTH3O43739 400 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 BMP15O95972 392 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 MAP3K9P80192 1104 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 NFIXQ14938 502 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 SBK1Q52WX2 424 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 IQUBQ8NA54 791 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 PNMA1Q8ND90 353 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 PLIN2Q99541 437 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 VPS16Q9H269 839 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.52
CLSTN1-203ENST00000435891 SEC31AO94979 1220 aaKnown RBP11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 CASQ1P31415 396 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 KRT31Q15323 416 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 C12orf60Q5U649 245 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 MRFAP1Q9Y605 127 aa11.77□□□□□ -0.53
CLSTN1-203ENST00000435891 MFAP3LO75121 409 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms