RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 KRT40Q6A162 431 aa17.46■□□□□ 0.39
TMEM40-204ENST00000435218 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
TMEM40-204ENST00000435218 GOPCQ9HD26 462 aa17.46■□□□□ 0.39
TMEM40-204ENST00000435218 SCG2P13521 617 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 INPP5BP32019 993 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 ECE1P42892 770 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
TMEM40-204ENST00000435218 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.38
TMEM40-204ENST00000435218 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
TMEM40-204ENST00000435218 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
TMEM40-204ENST00000435218 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 NDUFB10O96000 172 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 SLC1A4P43007 532 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 MTMR8Q96EF0 704 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 WRNIP1Q96S55 665 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
TMEM40-204ENST00000435218 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 hCG_1984214I3L0E3 225 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 USP2O75604 605 aaPredicted RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 MMP1P03956 469 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 BTNL9Q6UXG8 535 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 ZNF713Q8N859 430 aaPredicted RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 RRP36Q96EU6 259 aaKnown RBP17.43■□□□□ 0.38
TMEM40-204ENST00000435218 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 TRPM7Q96QT4 1865 aa17.43■□□□□ 0.38
TMEM40-204ENST00000435218 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 PPP1R12BO60237 982 aaPredicted RBP17.42■□□□□ 0.38
TMEM40-204ENST00000435218 PLA2G6O60733 806 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 BMP3P12645 472 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 PTMSP20962 102 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMEM40-204ENST00000435218 FOSBP53539 338 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 GUCY1B3Q02153 619 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 CDCA5Q96FF9 252 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 AS3MTQ9HBK9 375 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 RLFQ13129 1914 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 PTPRAP18433 802 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 NF2P35240 595 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 MAP3K11Q16584 847 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 EAPPQ56P03 285 aaPredicted RBP17.42■□□□□ 0.38
TMEM40-204ENST00000435218 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 LPAR1Q92633 364 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
TMEM40-204ENST00000435218 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
TMEM40-204ENST00000435218 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
TMEM40-204ENST00000435218 hCG_1642624A0A1W2PR95 340 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
TMEM40-204ENST00000435218 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 KCTD1Q719H9 257 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
TMEM40-204ENST00000435218 UBA5Q9GZZ9 404 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 CPVLQ9H3G5 476 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 JMJD4Q9H9V9 463 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 BARHL2Q9NY43 387 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 VPS54Q9P1Q0 977 aa17.41■□□□□ 0.38
TMEM40-204ENST00000435218 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
TMEM40-204ENST00000435218 IREB2P48200 963 aaKnown RBP17.4■□□□□ 0.38
TMEM40-204ENST00000435218 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 CCDC148Q8NFR7 591 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 PIGSQ96S52 555 aa17.4■□□□□ 0.38
TMEM40-204ENST00000435218 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
TMEM40-204ENST00000435218 PNMA6FA0A0J9YX94 578 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 STXBP3O00186 592 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
TMEM40-204ENST00000435218 CALML3P27482 149 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 USP14P54578 494 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 KRT85P78386 507 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
TMEM40-204ENST00000435218 NPY5RQ15761 445 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 WWC2Q6AWC2 1192 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
TMEM40-204ENST00000435218 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
TMEM40-204ENST00000435218 FEZ1Q99689 392 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 KCNJ14Q9UNX9 436 aa17.39■□□□□ 0.37
TMEM40-204ENST00000435218 ESYT2A0FGR8 921 aa17.38■□□□□ 0.37
TMEM40-204ENST00000435218 UNCXA6NJT0 531 aa17.38■□□□□ 0.37
TMEM40-204ENST00000435218 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
TMEM40-204ENST00000435218 ZBTB5O15062 677 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms