RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
CHRNA1-207ENST00000435083 C1orf53Q5VUE5 145 aa14□□□□□ -0.17
CHRNA1-207ENST00000435083 CCDC17Q96LX7 622 aa14□□□□□ -0.17
CHRNA1-207ENST00000435083 TTYH1Q9H313 450 aaPredicted RBP14□□□□□ -0.17
CHRNA1-207ENST00000435083 PHF24Q9UPV7 400 aa14□□□□□ -0.17
CHRNA1-207ENST00000435083 SMCHD1A6NHR9 2005 aa14□□□□□ -0.17
CHRNA1-207ENST00000435083 RAD21O60216 631 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 MBD4O95243 580 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 CDK8P49336 464 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 KCTD2Q14681 263 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 RNF180Q86T96 592 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 AMOTL1Q8IY63 956 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 ATP8A2Q9NTI2 1148 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 NRBP1Q9UHY1 535 aa13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 COL11A1P12107 1806 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-207ENST00000435083 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 A0A0C4DFX4 3053 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 PARP14Q460N5 1801 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 CYP2D7A0A087X1C5 515 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 CLTBP09497 229 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 EEF2P13639 858 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 RAG1P15918 1043 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 TAL1P17542 331 aaPredicted RBP13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 ITGB8P26012 769 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 RIOX2Q8IUF8 465 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 TINF2Q9BSI4 451 aa13.98□□□□□ -0.17
CHRNA1-207ENST00000435083 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 USP17L21D6R901 530 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 PQBP1O60828 265 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 FOSL2P15408 326 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 ADD2P35612 726 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 STAT3P40763 770 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 EPHB4P54760 987 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 C12orf60Q5U649 245 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 PLXNA1Q9UIW2 1896 aa13.97□□□□□ -0.17
CHRNA1-207ENST00000435083 A0A1W2PQ45 241 aaPredicted RBP13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 A0A1W2PQY0 241 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 VWA5AO00534 786 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 DDRGK1Q96HY6 314 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 BOLA2Q9H3K6 86 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 GOPCQ9HD26 462 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 TMEM39AQ9NV64 488 aa13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
CHRNA1-207ENST00000435083 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 KIAA0355O15063 1070 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 AKR1A1P14550 325 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 FPGSQ05932 587 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 C16orf86Q6ZW13 317 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.18
CHRNA1-207ENST00000435083 ZNF214Q9UL59 606 aaPredicted RBP13.95□□□□□ -0.18
CHRNA1-207ENST00000435083 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
CHRNA1-207ENST00000435083 TMEM265A0A087WTH1 108 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 DCDC2CA8MYV0 355 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 ADAMTS4O75173 837 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 HMMRO75330 724 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 CHGBP05060 677 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 COPB2P35606 906 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 SLC4A3P48751 1232 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 ACLYP53396 1101 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 RPAP2Q8IXW5 612 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 DDX11Q96FC9 970 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 STARD7Q9NQZ5 370 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 FAM184BQ9ULE4 1060 aa13.94□□□□□ -0.18
CHRNA1-207ENST00000435083 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 ATP5JP18859 108 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 NUP133Q8WUM0 1156 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 SYNRGQ9UMZ2 1314 aa13.93□□□□□ -0.18
CHRNA1-207ENST00000435083 ROBO3Q96MS0 1386 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 RAB11FIP3O75154 756 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 GRIN2CQ14957 1233 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 KCNA10Q16322 511 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 SNRNP48Q6IEG0 339 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 ANKRD33Q7Z3H0 272 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 TOX2Q96NM4 488 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms